Alias: ACD30_10963.70249.11
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD30_12_1
GWA1_OP11_36_8, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
180..566
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Peptide methionine sulfoxide reductase MsrB (EC:1.8.4.12)
TIGR00357: methionine-R-sulfoxide reductase (db=HMMTigr db_id=TIGR00357 from=2 to=128 evalue=1.5e-63 interpro_id=IPR002579 interpro_description=Methionine sulphoxide reductase B GO=Molecular Function: peptide-methionine-(S)-S-oxide reductase activity (GO:0008113), Biological Process: oxidation reduction (GO:0055114))
Mss4-like (db=superfamily db_id=SSF51316 from=1 to=128 evalue=4.9e-55 interpro_id=IPR011057 interpro_description=Mss4-like)
METHIONINE SULFOXIDE REDUCTASE (db=HMMPanther db_id=PTHR10173 from=5 to=124 evalue=1.6e-48)
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ACD30_12_2
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(605..916)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
seg (db=Seg db_id=seg from=11 to=16)
seg (db=Seg db_id=seg from=21 to=42)
seg (db=Seg db_id=seg from=88 to=102)
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ACD30_12_3
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(937..2244)
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Glutamyl-tRNA synthetase n=5 Tax=Dehalococcoides RepID=SYE_DEHSB (db=UNIREF evalue=1.0e-104 bit_score=384.0 identity=42.98 coverage=96.7889908256881)
gltX; glutamyl-tRNA synthetase
gltX; glutamyl-tRNA synthetase
AA_TRNA_LIGASE_I (db=PatternScan db_id=PS00178 from=9 to=20 evalue=0.0 interpro_id=IPR001412 interpro_description=Aminoacyl-tRNA synthetase, class I, conserved site GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: tRNA aminoacylation for protein translation (GO:0006418))
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ACD30_12_4
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
2314..3336
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transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
seg (db=Seg db_id=seg from=16 to=28)
seg (db=Seg db_id=seg from=43 to=51)
Uncharacterized protein {ECO:0000313|EMBL:KKQ07892.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
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ACD30_12_5
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(3338..4216)
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D-alanyl-D-alanine carboxypeptidase
no description (db=Gene3D db_id=G3DSA:3.40.710.10 from=42 to=289 evalue=9.1e-66)
beta-lactamase/transpeptidase-like (db=superfamily db_id=SSF56601 from=50 to=289 evalue=1.2e-58 interpro_id=IPR012338 interpro_description=Beta-lactamase-type transpeptidase fold)
Peptidase_S11 (db=HMMPfam db_id=PF00768 from=49 to=272 evalue=2.4e-55 interpro_id=IPR001967 interpro_description=Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO=Biological Process: proteolysis (GO:0006508), Molecular Function: serine-type D-Ala-D-Ala carboxypeptidase activity (GO:0009002))
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ACD30_12_6
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(4272..5621)
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Aspartyl-tRNA synthetase n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TTK0_ALKMQ (db=UNIREF evalue=1.0e-91 bit_score=340.0 identity=43.02 coverage=94.8888888888889)
aspC; aspartyl-tRNA synthetase (EC:6.1.1.12)
aspC; aspartyl-tRNA synthetase (EC:6.1.1.12)
ASPARTYL/LYSYL-TRNA SYNTHETASE (db=HMMPanther db_id=PTHR22594 from=82 to=430 evalue=4.6e-107 interpro_id=IPR018150 interpro_description=Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: tRNA aminoacylation for protein translation (GO:00
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ACD30_12_7
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
5920..6747
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5920..6747 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:KKQ07440.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
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ACD30_12_8
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(6754..7188)
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protein hit
HISTIDINE TRIAD (HIT) PROTEIN (db=HMMPanther db_id=PTHR23089 from=23 to=123 evalue=4.1e-13 interpro_id=IPR001310 interpro_description=Histidine triad (HIT) protein)
HIT_1 (db=PatternScan db_id=PS00892 from=94 to=112 evalue=0.0 interpro_id=IPR019808 interpro_description=Histidine triad, conserved site)
HIT-like (db=superfamily db_id=SSF54197 from=2 to=120 evalue=3.0e-20 interpro_id=IPR011146 interpro_description=Histidine triad-like motif GO=Molecular Function: catalytic activity (GO:0003824))
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ACD30_12_9
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
7455..7655
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7455..7655 + (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_37_16_curated
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ACD30_12_10
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(7659..8375)
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LmbE family protein n=3 Tax=Chloroflexus RepID=A9WIU4_CHLAA (db=UNIREF evalue=9.0e-51 bit_score=203.0 identity=46.38 coverage=96.652719665272)
putative deacetylase
LmbE-like (db=superfamily db_id=SSF102588 from=6 to=235 evalue=1.2e-50)
N-ACETYLGLUCOSAMINYL-PHOSPHATIDYLINOSITOL DE-N-ACETYLASE-RELATED (db=HMMPanther db_id=PTHR12993 from=1 to=215 evalue=1.1e-37 interpro_id=IPR003737 interpro_description=N-acetylglucosaminyl phosphatidylinositol deacetylase)
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ACD30_12_11
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
8437..8868
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seg (db=Seg db_id=seg from=73 to=92)
seg 73..92 Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_37_16_curated
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ACD30_12_12
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(8865..10451)
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exonuclease RecJ (EC:3.1.-.-)
exonuclease RecJ (EC:3.1.-.-)
Single-stranded-DNA-specific exonuclease RecJ n=2 Tax=Geobacillus RepID=C6QKN0_9BACI (db=UNIREF evalue=1.0e-86 bit_score=324.0 identity=37.71 coverage=96.5973534971645)
seg (db=Seg db_id=seg from=426 to=441)
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ACD30_12_13
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
10503..11891
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polyA polymerase
polyA polymerase
PolyA polymerase family protein n=1 Tax=Treponema denticola RepID=Q73NW9_TREDE (db=UNIREF evalue=5.0e-87 bit_score=325.0 identity=42.98 coverage=94.1684665226782)
seg (db=Seg db_id=seg from=174 to=185)
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ACD30_12_14
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(11898..13148)
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EF_HAND_1 (db=PatternScan db_id=PS00018 from=369 to=381 evalue=0.0 interpro_id=IPR018247 interpro_description=EF-Hand 1, calcium-binding site)
EF_HAND_1 (db=PatternScan db_id=PS00018 from=396 to=408 evalue=0.0 interpro_id=IPR018247 interpro_description=EF-Hand 1, calcium-binding site)
Type I dockerin domain (db=superfamily db_id=SSF63446 from=362 to=415 evalue=9.6e-07 interpro_id=IPR016134 interpro_description=Cellulosome enzyme, dockerin type I GO=Biological Process: polysaccharide catabolic process (GO:0000272))
Uncharacterized protein {ECO:0000313|EMBL:KKQ07433.1}; Flags: Fragment;; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
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ACD30_12_15
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(14804..16042)
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EF_HAND_1 (db=PatternScan db_id=PS00018 from=392 to=404 evalue=0.0 interpro_id=IPR018247 interpro_description=EF-Hand 1, calcium-binding site)
EF_HAND_1 (db=PatternScan db_id=PS00018 from=365 to=377 evalue=0.0 interpro_id=IPR018247 interpro_description=EF-Hand 1, calcium-binding site)
Type I dockerin domain (db=superfamily db_id=SSF63446 from=358 to=411 evalue=1.8e-08 interpro_id=IPR016134 interpro_description=Cellulosome enzyme, dockerin type I GO=Biological Process: polysaccharide catabolic process (GO:0000272))
no description (db=Gene3D db_id=G3DSA:1.10.1330.10 from=358 to=407 evalue=0.00044 interpro_id=IPR016134 interpro_description=Cellulosome enzyme, dockerin type I GO=Biological Process: polysaccharide catabolic process (GO:0000272))
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ACD30_12_16
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(16063..17601)
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seg (db=Seg db_id=seg from=457 to=501)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
Pectin lyase-like (db=superfamily db_id=SSF51126 from=108 to=431 evalue=1.1e-13 interpro_id=IPR011050 interpro_description=Pectin lyase fold/virulence factor)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_37_16_curated
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ACD30_12_17
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(17607..19286)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=17 to=39)
seg (db=Seg db_id=seg from=19 to=37)
seg (db=Seg db_id=seg from=63 to=75)
seg (db=Seg db_id=seg from=89 to=102)
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ACD30_12_18
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(19330..20946)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
seg (db=Seg db_id=seg from=4 to=20)
transmembrane_regions (db=TMHMM db_id=tmhmm from=100 to=122)
transmembrane_regions (db=TMHMM db_id=tmhmm from=135 to=154)
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ACD30_12_19
uncultured bacterium, Bacteria
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Not on your lists |
comp(20963..21823)
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Protein translocase subunit SecF
seg (db=Seg db_id=seg from=8 to=19)
transmembrane_regions (db=TMHMM db_id=tmhmm from=178 to=199)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
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ACD30_12_20
GWA1_OP11_36_8, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(21894..22229)
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coiled-coil (db=Coil db_id=coil from=81 to=102 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:KKQ15135.1}; TaxID=1618417 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA1_36_8.;"
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ACD30_12_21
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(22226..23104)
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seg (db=Seg db_id=seg from=97 to=112)
Uncharacterized protein {ECO:0000313|EMBL:KKQ07500.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
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ACD30_12_22
uncultured bacterium, Bacteria
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Not on your lists |
comp(23106..24413)
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hypothetical protein
hypothetical protein
Protein-export membrane protein n=1 Tax=Gloeobacter violaceus RepID=Q7NDR6_GLOVI (db=UNIREF evalue=3.0e-85 bit_score=319.0 identity=50.13 coverage=83.0275229357798)
seg (db=Seg db_id=seg from=7 to=16)
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ACD30_12_23
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(24415..24999)
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Transcriptional regulator
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1J9G3_9ARCH (db=UNIREF evalue=5.0e-29 bit_score=130.0 identity=39.13 coverage=93.3333333333333)
coiled-coil (db=Coil db_id=coil from=31 to=52 evalue=NA)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=7 to=70 evalue=2.8e-07)
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ACD30_12_24
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(25024..26193)
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hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=16 to=38)
DUF3048 (db=HMMPfam db_id=PF11258 from=83 to=378 evalue=1.2e-70 interpro_id=IPR021416 interpro_description=Protein of unknown function DUF3048)
Uncharacterized protein {ECO:0000313|EMBL:KKQ07497.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
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ACD30_12_25
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(26186..26650)
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hypothetical protein
coiled-coil (db=Coil db_id=coil from=130 to=151 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
seg (db=Seg db_id=seg from=10 to=21)
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ACD30_12_26
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(26739..26978)
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Putative uncharacterized protein n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IRC4_9CHRO (db=UNIREF evalue=4.0e-08 bit_score=60.5 identity=37.84 coverage=86.25)
DUF3680 (db=HMMPfam db_id=PF12441 from=2 to=34 evalue=3.1e-09 interpro_id=IPR022148 interpro_description=Protein of unknown function DUF3680)
RHH_1 (db=HMMPfam db_id=PF01402 from=39 to=74 evalue=3.5e-05 interpro_id=IPR002145 interpro_description=CopG-like DNA-binding GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
Uncharacterized protein {ECO:0000313|EMBL:KKQ07495.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
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ACD30_12_27
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(26998..27276)
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ACD30_12_28
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
27486..27659
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transmembrane_regions (db=TMHMM db_id=tmhmm from=31 to=53)
transmembrane_regions 31..53 Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_37_16_curated
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ACD30_12_29
GWA1_OP11_36_8, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
27688..27837
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hypothetical protein
Putative uncharacterized protein n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D4XZY5_9CHLR (db=UNIREF evalue=2.0e-09 bit_score=65.1 identity=63.64 coverage=86.0)
Uncharacterized protein {ECO:0000313|EMBL:KKQ14889.1}; TaxID=1618417 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA1_36_8.;"
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ACD30_12_30
GWA1_OP11_36_8, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(27952..29472)
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Mg chelatase subunit ChlI
Mg chelatase subunit ChlI
Mg chelatase, subunit ChlI n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AWT2_HERA2 (db=UNIREF evalue=1.0e-153 bit_score=546.0 identity=55.14 coverage=98.6193293885602)
seg (db=Seg db_id=seg from=124 to=138)
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