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ACD30_15

Alias: ACD30_30958.35019.10

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD30_15_1
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists


comp(1..717)
DNA (717bp) protein (239aa)
30S ribosomal protein S2
30S ribosomal protein S2 n=3 Tax=Helicobacter RepID=C5F2G5_9HELI (db=UNIREF evalue=5.0e-51 bit_score=204.0 identity=41.2 coverage=97.071129707113)
seg (db=Seg db_id=seg from=50 to=67)
coiled-coil (db=Coil db_id=coil from=75 to=96 evalue=NA)
ACD30_15_2
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(809..1039)
DNA (231bp) protein (77aa)
809..1039 - (rbs_motif=TAA rbs_spacer=4bp)
Uncharacterized protein {ECO:0000313|EMBL:KKQ07843.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
ACD30_15_3
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(1086..1652)
DNA (567bp) protein (189aa)
dfrA; Dihydrofolate reductase (EC:1.5.1.3)
DHFR_1 (db=PatternScan db_id=PS00075 from=15 to=37 evalue=0.0 interpro_id=IPR017925 interpro_description=Dihydrofolate reductase conserved site)
Dihydrofolate reductase-like (db=superfamily db_id=SSF53597 from=2 to=188 evalue=6.3e-58)
DHFR_1 (db=HMMPfam db_id=PF00186 from=3 to=183 evalue=4.9e-52 interpro_id=IPR001796 interpro_description=Dihydrofolate reductase domain GO=Molecular Function: dihydrofolate reductase activity (GO:0004146), Biological Process: glycine biosynthetic process (GO:0006545), Biological Process: nucleotide biosynthetic process (GO:0009165))
ACD30_15_4
GWB1_OP11_38_5_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

1711..2547
DNA (837bp) protein (279aa)
Thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UE73_9RHOB (db=UNIREF evalue=3.0e-30 bit_score=135.0 identity=30.95 coverage=87.8136200716846)
Thymidylate synthase/dCMP hydroxymethylase (db=superfamily db_id=SSF55831 from=5 to=277 evalue=6.3e-61 interpro_id=IPR000398 interpro_description=Thymidylate synthase GO=Molecular Function: thymidylate synthase activity (GO:0004799), Biological Process: dTMP biosynthetic process (GO:0006231))
Thymidylat_synt (db=HMMPfam db_id=PF00303 from=6 to=252 evalue=2.8e-59 interpro_id=IPR000398 interpro_description=Thymidylate synthase GO=Molecular Function: thymidylate synthase activity (GO:0004799), Biological Process: dTMP biosynthetic process (GO:0006231))
ACD30_15_5
GWA1_OP11_36_8, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

2566..3219
DNA (654bp) protein (218aa)
deoxycytidine triphosphate deaminase
seg (db=Seg db_id=seg from=187 to=195)
dUTPase-like (db=superfamily db_id=SSF51283 from=5 to=179 evalue=1.3e-31)
no description (db=Gene3D db_id=G3DSA:2.70.40.10 from=6 to=178 evalue=6.0e-30)
ACD30_15_6
GWB1_OP11_38_5_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

3222..4247
DNA (1026bp) protein (342aa)
3222..4247 + (rbs_motif=None rbs_spacer=None)
Tax=GWB1_OP11_38_5_partial
ACD30_15_7
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(4240..4923)
DNA (684bp) protein (228aa)
Thymidylate kinase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PY20_9BACT (db=UNIREF evalue=8.0e-43 bit_score=176.0 identity=38.89 coverage=93.859649122807)
tmk; thymidylate kinase Tmk (EC:2.7.4.9)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=6 to=217 evalue=1.6e-37)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=222 evalue=2.9e-36)
ACD30_15_8
GWB1_OP11_38_5_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(4916..6520)
DNA (1605bp) protein (535aa)
pyrG; CTP synthase PyrG (EC:6.3.4.2)
pyrG; CTP synthase PyrG (EC:6.3.4.2)
CTP synthase n=1 Tax=Dialister invisus DSM 15470 RepID=C9LPR3_9FIRM (db=UNIREF evalue=2.0e-132 bit_score=476.0 identity=50.19 coverage=95.7009345794393)
seg (db=Seg db_id=seg from=254 to=272)
ACD30_15_9
GWB1_OP11_38_5_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

6753..8171
DNA (1419bp) protein (473aa)
seg (db=Seg db_id=seg from=318 to=328)
Tax=GWB1_OP11_38_5_partial
ACD30_15_10
GWB1_OP11_38_5_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(8168..8725)
DNA (558bp) protein (186aa)
DNA topoisomerase I
seg (db=Seg db_id=seg from=84 to=104)
Prokaryotic type I DNA topoisomerase (db=superfamily db_id=SSF56712 from=1 to=119 evalue=1.5e-32 interpro_id=IPR000380 interpro_description=DNA topoisomerase, type IA, core GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA topoisomerase type I activity (GO:0003917), Cellular Component: chromosome (GO:0005694), Biological Process: DNA topological change (GO:0006265))
no description (db=Gene3D db_id=G3DSA:1.10.460.10 from=1 to=104 evalue=4.0e-30 interpro_id=IPR013824 interpro_description=DNA topoisomerase, type IA, central region, subdomain 1 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA topoisomerase activity (GO:0003916), Cellular Component: chromosome (GO:0005694), Biological Process: DNA topological change (GO:0006265), Biological Process: DNA unwinding involved in replication (GO:0006268))
ACD30_15_11

Not on your lists

9977..10150
DNA (174bp) protein (58aa)
seg (db=Seg db_id=seg from=17 to=37)
Uncharacterized protein {ECO:0000313|EMBL:EKD91252.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD30_15_12
GWB1_OP11_38_5_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(10573..13164)
DNA (2592bp) protein (864aa)
hypothetical protein
hypothetical protein
ATP-dependent Clp protease, regulatory subunit n=2 Tax=Cyanothece RepID=B1WT22_CYAA5 (db=UNIREF evalue=5.0e-92 bit_score=343.0 identity=33.95 coverage=75.6944444444444)
transmembrane_regions (db=TMHMM db_id=tmhmm from=66 to=88)
ACD30_15_13
GWB1_OP11_38_5_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(13247..13627)
DNA (381bp) protein (127aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
coiled-coil (db=Coil db_id=coil from=47 to=68 evalue=NA)
Tax=GWB1_OP11_38_5_partial
ACD30_15_14
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(13648..14724)
DNA (1077bp) protein (359aa)
Rossmann fold DNA uptake nucleotide-binding protein
dprA: DNA protecting protein DprA (db=HMMTigr db_id=TIGR00732 from=68 to=286 evalue=7.2e-100 interpro_id=IPR003488 interpro_description=DNA recombination-mediator protein A GO=Biological Process: DNA mediated transformation (GO:0009294))
DNA_processg_A (db=HMMPfam db_id=PF02481 from=73 to=277 evalue=5.8e-77 interpro_id=IPR003488 interpro_description=DNA recombination-mediator protein A GO=Biological Process: DNA mediated transformation (GO:0009294))
MoCo carrier protein-like (db=superfamily db_id=SSF102405 from=79 to=286 evalue=1.3e-40)
ACD30_15_15
GWB1_OP11_38_5_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(14751..15191)
DNA (441bp) protein (147aa)
seg (db=Seg db_id=seg from=105 to=117)
Tax=GWB1_OP11_38_5_partial
ACD30_15_16
GWB1_OP11_38_5_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

15372..15911
DNA (540bp) protein (180aa)
15372..15911 + (rbs_motif=TAA rbs_spacer=8bp)
Tax=GWB1_OP11_38_5_partial
ACD30_15_17
GWB1_OP11_38_5_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(15913..17784)
DNA (1872bp) protein (624aa)
Peptidoglycan glycosyltransferase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HP01_9FIRM (db=UNIREF evalue=2.0e-94 bit_score=350.0 identity=36.7 coverage=85.5769230769231)
pbpA; putative peptidoglycan glycosyltransferase (EC:2.4.1.129)
pbpA; putative peptidoglycan glycosyltransferase (EC:2.4.1.129)
seg (db=Seg db_id=seg from=36 to=47)
ACD30_15_18
GWB1_OP11_38_5_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(17794..18243)
DNA (450bp) protein (150aa)
seg (db=Seg db_id=seg from=3 to=19)
seg (db=Seg db_id=seg from=41 to=54)
seg (db=Seg db_id=seg from=127 to=138)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
ACD30_15_19
GWB1_OP11_38_5_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(18243..19034)
DNA (792bp) protein (264aa)
mreC; rod shape-determining protein MreC
putative spore coat protein regulator protein YlbO n=2 Tax=Fusobacterium RepID=UPI0001BC5A13 (db=UNIREF evalue=2.0e-18 bit_score=96.7 identity=29.69 coverage=94.3181818181818)
coiled-coil (db=Coil db_id=coil from=80 to=101 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=11 to=33)
ACD30_15_20
GWA1_OP11_36_8, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

19201..20049
DNA (849bp) protein (283aa)
aspartate carbamoyltransferase
CARBAMOYLTRANSFERASE (db=PatternScan db_id=PS00097 from=23 to=30 evalue=0.0 interpro_id=IPR006130 interpro_description=Aspartate/ornithine carbamoyltransferase GO=Biological Process: cellular amino acid metabolic process (GO:0006520), Molecular Function: amino acid binding (GO:0016597), Molecular Function: carboxyl- or carbamoyltransferase activity (GO:0016743))
CARBAMOYLTRANSFERASE RELATED (db=HMMPanther db_id=PTHR11405 from=1 to=282 evalue=1.4e-103)
asp_carb_tr: aspartate carbamoyltransfera (db=HMMTigr db_id=TIGR00670 from=1 to=282 evalue=1.8e-85 interpro_id=IPR002082 interpro_description=Aspartate carbamoyltransferase, eukaryotic GO=Molecular Function: aspartate carbamoyltransferase activity (GO:0004070), Biological Process: 'de novo' pyrimidine base biosynthetic process (GO:0006207))
ACD30_15_21
GWB1_OP11_38_5_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

20663..20929
DNA (267bp) protein (89aa)
pyrF; Orotidine 5'-phosphate decarboxylase (OMP decarboxylase) (OMPDCase) (EC:4.1.1.23)
Ribulose-phoshate binding barrel (db=superfamily db_id=SSF51366 from=2 to=85 evalue=1.5e-16 interpro_id=IPR011060 interpro_description=Ribulose-phosphate binding barrel GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
pyrF; orotidine 5'-phosphate decarboxylase (OMP decarboxylase) (OMPDCase) (EC:4.1.1.23); K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] alias=ACD30_C00015G00021,ACD30_30958.35019.10G0021,ACD30_30958.35019.10_21 id=36054 tax=ACD30 species=unknown genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria organism_group=OP11 organism_desc=OP11
Orotidine 5'-phosphate decarboxylase Tax=GWB1_OP11_38_5_partial
ACD30_15_22
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

20922..22712
DNA (1791bp) protein (597aa)
UPI00016E4791 related cluster n=2 Tax=Tetraodontidae RepID=UPI00016E4791 (db=UNIREF evalue=3.0e-95 bit_score=353.0 identity=48.4 coverage=57.1189279731993)
pyrC; dihydroorotase
pyrC; dihydroorotase
seg (db=Seg db_id=seg from=230 to=244)
ACD30_15_23

Not on your lists

22709..23848
DNA (1140bp) protein (380aa)
dihydroorotate dehydrogenase
Dihydroorotate dehydrogenase n=2 Tax=Leptospirillum sp. Group II RepID=A3ETM0_9BACT (db=UNIREF evalue=5.0e-35 bit_score=152.0 identity=29.73 coverage=92.1052631578947)
seg (db=Seg db_id=seg from=191 to=204)
DHODEHASE_2 (db=PatternScan db_id=PS00912 from=334 to=354 evalue=0.0 interpro_id=IPR001295 interpro_description=Dihydroorotate dehydrogenase, conserved site GO=Molecular Function: dihydroorotate dehydrogenase activity (GO:0004152), Biological Process: 'de novo' pyrimidine base biosynthetic process (GO:0006207), Biological Process: oxidation reduction (GO:0055114))
ACD30_15_24

Not on your lists

comp(23826..23933)
DNA (108bp) protein (36aa)
23826..23933 - (rbs_motif=TAA rbs_spacer=10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD91232.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD30_15_25
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(24167..24433)
DNA (267bp) protein (89aa)
24167..24433 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:KKQ09098.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
ACD30_15_26
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(24524..25570)
DNA (1047bp) protein (349aa)
Rod shape-determining protein mreB n=2 Tax=Thermomicrobia (class) RepID=B9L238_THERP (db=UNIREF evalue=1.0e-114 bit_score=416.0 identity=62.88 coverage=92.2636103151863)
rod shape-determining protein MreB
rod shape-determining protein MreB
seg (db=Seg db_id=seg from=331 to=338)
ACD30_15_27
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

25665..26051
DNA (387bp) protein (129aa)
seg (db=Seg db_id=seg from=44 to=61)
seg (db=Seg db_id=seg from=113 to=124)
Uncharacterized protein {ECO:0000313|EMBL:KKQ09096.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
ACD30_15_28
GWA1_OP11_36_8, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

26098..28290
DNA (2193bp) protein (731aa)
hypothetical protein
TPR repeat-containing protein n=1 Tax=Dictyoglomus turgidum DSM 6724 RepID=B8E0S1_DICTD (db=UNIREF evalue=2.0e-11 bit_score=75.5 identity=20.96 coverage=52.6675786593707)
seg (db=Seg db_id=seg from=101 to=116)
seg (db=Seg db_id=seg from=251 to=261)
ACD30_15_29
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

28287..28553
DNA (267bp) protein (89aa)
Putative uncharacterized protein n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVC1_9BACT (db=UNIREF evalue=2.0e-12 bit_score=75.1 identity=48.84 coverage=94.3820224719101)
Uncharacterized protein {ECO:0000313|EMBL:KKQ09094.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
hypothetical protein
ACD30_15_30
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(28546..29175)
DNA (630bp) protein (210aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=33 to=55)
transmembrane_regions 33..55 Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_37_16_curated
Displaying items 1-30 of 38 in total

View Taxonomy