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ACD30_18

Alias: ACD30_52946.33977.9

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD30_18_1

Not on your lists

comp(291..3227)
DNA (2937bp) protein (979aa)
GDP-mannose 4,6 dehydratase ISS
seg (db=Seg db_id=seg from=343 to=360)
transmembrane_regions (db=TMHMM db_id=tmhmm from=370 to=392)
coiled-coil (db=Coil db_id=coil from=138 to=159 evalue=NA)
ACD30_18_2
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(3291..3695)
DNA (405bp) protein (135aa)
ribonuclease HI
ribonuclease H n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C541E (db=UNIREF evalue=6.0e-22 bit_score=106.0 identity=40.91 coverage=94.0740740740741)
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=1 to=129 evalue=8.6e-27 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
no description (db=Gene3D db_id=G3DSA:3.30.420.10 from=2 to=131 evalue=6.4e-16)
ACD30_18_3
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(3692..4921)
DNA (1230bp) protein (410aa)
Membrane protein involved in the export of O-antigen and teichoic acid
transmembrane_regions (db=TMHMM db_id=tmhmm from=383 to=405)
transmembrane_regions (db=TMHMM db_id=tmhmm from=357 to=379)
transmembrane_regions (db=TMHMM db_id=tmhmm from=326 to=345)
ACD30_18_4
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(4896..6158)
DNA (1263bp) protein (421aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=369 to=391)
transmembrane_regions (db=TMHMM db_id=tmhmm from=334 to=356)
transmembrane_regions (db=TMHMM db_id=tmhmm from=223 to=245)
transmembrane_regions (db=TMHMM db_id=tmhmm from=189 to=211)
ACD30_18_5
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(6203..6646)
DNA (444bp) protein (148aa)
Jag; RNA-binding protein
seg (db=Seg db_id=seg from=6 to=19)
no description (db=HMMSmart db_id=SM00393 from=68 to=147 evalue=6.6e-14 interpro_id=IPR001374 interpro_description=Single-stranded nucleic acid binding R3H GO=Molecular Function: nucleic acid binding (GO:0003676))
R3H (db=HMMPfam db_id=PF01424 from=97 to=146 evalue=4.0e-12 interpro_id=IPR001374 interpro_description=Single-stranded nucleic acid binding R3H GO=Molecular Function: nucleic acid binding (GO:0003676))
ACD30_18_6
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(6726..7565)
DNA (840bp) protein (280aa)
yidC; preprotein translocase subunit YidC
Stage III sporulation protein J n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GKU7_9FUSO (db=UNIREF evalue=4.0e-17 bit_score=92.0 identity=34.51 coverage=75.0)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
transmembrane_regions (db=TMHMM db_id=tmhmm from=30 to=52)
ACD30_18_7
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists


comp(7728..8063)
DNA (336bp) protein (112aa)
Ribonuclease_P (db=HMMPfam db_id=PF00825 from=2 to=103 evalue=3.7e-19 interpro_id=IPR000100 interpro_description=Ribonuclease P GO=Molecular Function: tRNA binding (GO:0000049), Molecular Function: ribonuclease P activity (GO:0004526), Biological Process: tRNA processing (GO:0008033))
Ribosomal protein S5 domain 2-like (db=superfamily db_id=SSF54211 from=6 to=110 evalue=4.0e-15 interpro_id=IPR020568 interpro_description=Ribosomal protein S5 domain 2-type fold)
no description (db=Gene3D db_id=G3DSA:3.30.230.10 from=2 to=110 evalue=1.1e-11 interpro_id=IPR014721 interpro_description=Ribosomal protein S5 domain 2-type fold, subgroup)
rnpA: ribonuclease P protein component (db=HMMTigr db_id=TIGR00188 from=2 to=111 evalue=4.0e-11 interpro_id=IPR000100 interpro_description=Ribonuclease P GO=Molecular Function: tRNA binding (GO:0000049), Molecular Function: ribonuclease P activity (GO:0004526), Biological Process: tRNA processing (GO:0008033))
ACD30_18_8

Not on your lists

8303..9715
DNA (1413bp) protein (471aa)
Chromosomal replication initiator protein dnaA n=3 Tax=Clostridium botulinum RepID=DNAA_CLOBA (db=UNIREF evalue=3.0e-102 bit_score=375.0 identity=42.95 coverage=94.9044585987261)
dnaA; chromosomal replication initiation protein
dnaA; chromosomal replication initiation protein
DNAA (db=PatternScan db_id=PS01008 from=428 to=447 evalue=0.0 interpro_id=IPR018312 interpro_description=Chromosomal replication control, initiator DnaA, conserved site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA replication origin binding (GO:0003688), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA replication initiation (GO:0006270), Biological Process: regulation of DNA replication (GO:0006275))
ACD30_18_9
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

9930..10394
DNA (465bp) protein (155aa)
seg (db=Seg db_id=seg from=6 to=18)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=23)
Endonuc_Holl (db=HMMPfam db_id=PF10107 from=55 to=136 evalue=1.2e-09 interpro_id=IPR019287 interpro_description=Holliday junction resolvase-like)
seg 6..18 Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_37_16_curated
ACD30_18_10
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

10400..11518
DNA (1119bp) protein (373aa)
dnaN; DNA polymerase III subunit beta (EC:2.7.7.7)
no description (db=HMMSmart db_id=SM00480 from=17 to=367 evalue=1.2e-95 interpro_id=IPR001001 interpro_description=DNA polymerase III, beta chain GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Biological Process: DNA replication (GO:0006260), Molecular Function: 3'-5' exonuclease activity (GO:0008408), Cellular Component: DNA polymerase III complex (GO:0009360))
dnan: DNA polymerase III, beta subunit (db=HMMTigr db_id=TIGR00663 from=1 to=371 evalue=1.9e-85 interpro_id=IPR001001 interpro_description=DNA polymerase III, beta chain GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Biological Process: DNA replication (GO:0006260), Molecular Function: 3'-5' exonuclease activity (GO:0008408), Cellular Component: DNA polymerase III complex (GO:0009360))
DNA clamp (db=superfamily db_id=SSF55979 from=250 to=371 evalue=1.4e-30)
ACD30_18_11
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(11624..12076)
DNA (453bp) protein (151aa)
seg (db=Seg db_id=seg from=3 to=24)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=29)
Uncharacterized protein {ECO:0000313|EMBL:KKQ08502.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
ACD30_18_12
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(12076..12780)
DNA (705bp) protein (235aa)
seg (db=Seg db_id=seg from=5 to=22)
seg (db=Seg db_id=seg from=124 to=138)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=22)
Uncharacterized protein {ECO:0000313|EMBL:KKQ08503.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
ACD30_18_13
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(12788..13537)
DNA (750bp) protein (250aa)
seg (db=Seg db_id=seg from=4 to=16)
seg (db=Seg db_id=seg from=23 to=43)
Uncharacterized protein {ECO:0000313|EMBL:KKQ08504.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
ACD30_18_14
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(13537..14091)
DNA (555bp) protein (185aa)
seg (db=Seg db_id=seg from=19 to=39)
transmembrane_regions (db=TMHMM db_id=tmhmm from=17 to=39)
Uncharacterized protein {ECO:0000313|EMBL:KKQ08505.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
ACD30_18_15
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(14066..15985)
DNA (1920bp) protein (640aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=351 to=373)
transmembrane_regions (db=TMHMM db_id=tmhmm from=278 to=300)
transmembrane_regions (db=TMHMM db_id=tmhmm from=251 to=273)
seg (db=Seg db_id=seg from=359 to=370)
ACD30_18_16
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(17941..18747)
DNA (807bp) protein (269aa)
hypothetical protein
hypothetical protein cdiviTM7_00582 n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B267C (db=UNIREF evalue=1.0e-19 bit_score=100.0 identity=34.8 coverage=67.6579925650558)
seg (db=Seg db_id=seg from=49 to=60)
Uncharacterized protein {ECO:0000313|EMBL:KKQ08508.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
ACD30_18_17
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(18749..19876)
DNA (1128bp) protein (376aa)
seg (db=Seg db_id=seg from=160 to=173)
transmembrane_regions (db=TMHMM db_id=tmhmm from=53 to=75)
transmembrane_regions (db=TMHMM db_id=tmhmm from=29 to=51)
coiled-coil (db=Coil db_id=coil from=200 to=228 evalue=NA)
ACD30_18_18
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

20167..21186
DNA (1020bp) protein (340aa)
seg (db=Seg db_id=seg from=189 to=200)
Uncharacterized protein {ECO:0000313|EMBL:KKQ08510.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
ACD30_18_19
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

21388..23826
DNA (2439bp) protein (813aa)
coiled-coil (db=Coil db_id=coil from=7 to=28 evalue=NA)
seg (db=Seg db_id=seg from=11 to=38)
seg (db=Seg db_id=seg from=126 to=137)
Uncharacterized protein {ECO:0000313|EMBL:KKQ08511.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
ACD30_18_20
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(23832..25496)
DNA (1665bp) protein (555aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=211 to=233)
transmembrane_regions (db=TMHMM db_id=tmhmm from=312 to=334)
transmembrane_regions (db=TMHMM db_id=tmhmm from=349 to=371)
transmembrane_regions (db=TMHMM db_id=tmhmm from=378 to=400)
ACD30_18_21
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(25540..26121)
DNA (582bp) protein (194aa)
seg (db=Seg db_id=seg from=26 to=40)
transmembrane_regions (db=TMHMM db_id=tmhmm from=29 to=51)
seg 26..40 Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_37_16_curated
ACD30_18_22
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(26109..26426)
DNA (318bp) protein (106aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=40)
transmembrane_regions (db=TMHMM db_id=tmhmm from=55 to=77)
transmembrane_regions 21..40 Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_37_16_curated
ACD30_18_23
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(26470..26865)
DNA (396bp) protein (132aa)
seg (db=Seg db_id=seg from=12 to=29)
seg (db=Seg db_id=seg from=47 to=68)
seg (db=Seg db_id=seg from=87 to=113)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
ACD30_18_24
GWA1_OP11_36_8, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(26911..28059)
DNA (1149bp) protein (383aa)
hypothetical protein
seg (db=Seg db_id=seg from=11 to=24)
seg (db=Seg db_id=seg from=310 to=319)
seg (db=Seg db_id=seg from=327 to=338)
ACD30_18_25
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(28086..28544)
DNA (459bp) protein (153aa)
seg (db=Seg db_id=seg from=18 to=28)
seg (db=Seg db_id=seg from=121 to=139)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
transmembrane_regions (db=TMHMM db_id=tmhmm from=77 to=99)
ACD30_18_26
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(28541..28855)
DNA (315bp) protein (105aa)
seg (db=Seg db_id=seg from=75 to=90)
transmembrane_regions (db=TMHMM db_id=tmhmm from=35 to=57)
transmembrane_regions (db=TMHMM db_id=tmhmm from=70 to=92)
seg 75..90 Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_37_16_curated
ACD30_18_27
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(28858..29451)
DNA (594bp) protein (198aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=86 to=108)
transmembrane_regions (db=TMHMM db_id=tmhmm from=43 to=65)
transmembrane_regions 43..65 Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_37_16_curated
ACD30_18_28
GWA1_OP11_36_8, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(29456..29866)
DNA (411bp) protein (137aa)
S23 ribosomal protein
Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JGM1_9BACT (db=UNIREF evalue=1.0e-13 bit_score=79.0 identity=40.0 coverage=79.5620437956204)
Uncharacterised conserved protein, UCP035652 type (db=HMMPIR db_id=PIRSF035652 from=17 to=136 evalue=5.7e-23 interpro_id=IPR012657 interpro_description=Conserved hypothetical protein CHP02436)
Ribosomal_S23p (db=HMMPfam db_id=PF05635 from=26 to=119 evalue=2.8e-08 interpro_id=IPR008815 interpro_description=23S rRNA-associated protein)
ACD30_18_29
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(29895..30707)
DNA (813bp) protein (271aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=238 to=260)
transmembrane_regions (db=TMHMM db_id=tmhmm from=201 to=223)
transmembrane_regions 201..223 Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_37_16_curated
ACD30_18_30
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(30727..31179)
DNA (453bp) protein (151aa)
seg (db=Seg db_id=seg from=136 to=148)
seg (db=Seg db_id=seg from=98 to=107)
seg (db=Seg db_id=seg from=4 to=17)
transmembrane_regions 201..223 Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_37_16_curated
Displaying items 1-30 of 34 in total

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