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ACD30_19

Alias: ACD30_66121.39687.9

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD30_19_1
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(28..564)
DNA (537bp) protein (179aa)
Putative uncharacterized protein n=1 Tax=uncultured planctomycete 6FN RepID=A9LGZ7_9BACT (db=UNIREF evalue=6.0e-34 bit_score=146.0 identity=43.68 coverage=95.5307262569832)
NTPase
ITPase-like (db=superfamily db_id=SSF52972 from=3 to=178 evalue=2.8e-52)
NTPase_I-T (db=HMMPfam db_id=PF01931 from=10 to=175 evalue=3.2e-52 interpro_id=IPR002786 interpro_description=Protein of unknown function DUF84)
ACD30_19_2
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

602..1390
DNA (789bp) protein (263aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=5 to=20)
SGNH hydrolase (db=superfamily db_id=SSF52266 from=46 to=255 evalue=1.2e-14 interpro_id=IPR013830 interpro_description=Esterase, SGNH hydrolase-type)
no description (db=Gene3D db_id=G3DSA:3.40.50.1110 from=46 to=256 evalue=0.00014 interpro_id=IPR013831 interpro_description=Esterase, SGNH hydrolase-type, subgroup GO=Molecular Function: hydrolase activity (GO:0016787))
ACD30_19_3
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(1364..1486)
DNA (123bp) protein (41aa)
seg (db=Seg db_id=seg from=18 to=33)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
Uncharacterized protein {ECO:0000313|EMBL:KKQ10013.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
ACD30_19_4
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(1476..1841)
DNA (366bp) protein (122aa)
Phosphate regulon transcriptional regulatory protein PhoB (SphR)
Response regulator receiver n=1 Tax=Pedobacter sp. BAL39 RepID=A6E8D4_9SPHI (db=UNIREF evalue=8.0e-17 bit_score=89.4 identity=44.25 coverage=90.983606557377)
seg (db=Seg db_id=seg from=45 to=55)
CheY-like (db=superfamily db_id=SSF52172 from=1 to=118 evalue=3.2e-27 interpro_id=IPR011006 interpro_description=CheY-like)
ACD30_19_5
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

4449..5609
DNA (1161bp) protein (387aa)
Nuclease SbcCD, D subunit n=3 Tax=Dehalococcoides RepID=A5FR80_DEHSB (db=UNIREF evalue=5.0e-82 bit_score=308.0 identity=42.17 coverage=99.4832041343669)
nuclease SbcCD subunit D
nuclease SbcCD subunit D
coiled-coil (db=Coil db_id=coil from=329 to=350 evalue=NA)
ACD30_19_6
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(5574..6689)
DNA (1116bp) protein (372aa)
RNA-directed DNA polymerase
Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z415_9FIRM (db=UNIREF evalue=2.0e-60 bit_score=236.0 identity=40.29 coverage=90.8602150537634)
RVT_1 (db=HMMPfam db_id=PF00078 from=70 to=295 evalue=2.8e-29 interpro_id=IPR000477 interpro_description=RNA-directed DNA polymerase (reverse transcriptase) GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: RNA-directed DNA polymerase activity (GO:0003964), Biological Process: RNA-dependent DNA replication (GO:0006278))
DNA/RNA polymerases (db=superfamily db_id=SSF56672 from=25 to=337 evalue=1.5e-24)
ACD30_19_7
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(6918..7235)
DNA (318bp) protein (106aa)
seg (db=Seg db_id=seg from=11 to=23)
seg 11..23 Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_37_16_curated
ACD30_19_8
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(7536..8231)
DNA (696bp) protein (232aa)
seg (db=Seg db_id=seg from=206 to=219)
seg 206..219 Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_37_16_curated
ACD30_19_9
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(8317..8436)
DNA (120bp) protein (40aa)
seg (db=Seg db_id=seg from=4 to=27)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=29)
seg 4..27 Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_37_16_curated
ACD30_19_10
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

8471..8755
DNA (285bp) protein (95aa)
8471..8755 + (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_37_16_curated
ACD30_19_11
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

8752..10983
DNA (2232bp) protein (744aa)
ATPase involved in DNA repair
seg (db=Seg db_id=seg from=378 to=407)
seg (db=Seg db_id=seg from=171 to=181)
seg (db=Seg db_id=seg from=293 to=308)
ACD30_19_12
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

10999..11421
DNA (423bp) protein (141aa)
seg (db=Seg db_id=seg from=7 to=21)
seg (db=Seg db_id=seg from=38 to=52)
seg (db=Seg db_id=seg from=89 to=101)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
ACD30_19_13
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

11418..12854
DNA (1437bp) protein (479aa)
Methionyl-tRNA synthetase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDU2_THET1 (db=UNIREF evalue=2.0e-131 bit_score=473.0 identity=48.02 coverage=94.5720250521921)
methionyl-tRNA synthetase
methionyl-tRNA synthetase
AA_TRNA_LIGASE_I (db=PatternScan db_id=PS00178 from=11 to=22 evalue=0.0 interpro_id=IPR001412 interpro_description=Aminoacyl-tRNA synthetase, class I, conserved site GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: tRNA aminoacylation for protein translation (GO:0006418))
ACD30_19_14
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

12832..13278
DNA (447bp) protein (149aa)
NUDIX hydrolase
Nudix (db=superfamily db_id=SSF55811 from=16 to=147 evalue=4.4e-21 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
no description (db=Gene3D db_id=G3DSA:3.90.79.10 from=11 to=130 evalue=2.1e-12 interpro_id=IPR000086 interpro_description=NUDIX hydrolase domain GO=Molecular Function: hydrolase activity (GO:0016787))
NUDIX (db=HMMPfam db_id=PF00293 from=15 to=136 evalue=3.6e-10 interpro_id=IPR000086 interpro_description=NUDIX hydrolase domain GO=Molecular Function: hydrolase activity (GO:0016787))
ACD30_19_15
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

13282..14154
DNA (873bp) protein (291aa)
hydrolase TatD
Putative deoxyribonuclease (YcfH) n=1 Tax=NC10 bacterium 'Dutch sediment' RepID=D5MEP1_9BACT (db=UNIREF evalue=2.0e-44 bit_score=182.0 identity=37.72 coverage=86.2542955326461)
Mg-dependent DNase, TatD type (db=HMMPIR db_id=PIRSF005902 from=1 to=290 evalue=2.4e-68 interpro_id=IPR012278 interpro_description=Deoxyribonuclease, TatD Mg-dependent)
Metallo-dependent hydrolases (db=superfamily db_id=SSF51556 from=2 to=290 evalue=2.5e-60)
ACD30_19_16
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

14188..14499
DNA (312bp) protein (104aa)
14188..14499 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:KKQ10027.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
ACD30_19_17
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

14586..16352
DNA (1767bp) protein (589aa)
hypothetical protein
hypothetical protein cdiviTM7_00321 n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B25AF (db=UNIREF evalue=1.0e-55 bit_score=221.0 identity=30.88 coverage=68.2512733446519)
transmembrane_regions (db=TMHMM db_id=tmhmm from=99 to=121)
transmembrane_regions (db=TMHMM db_id=tmhmm from=56 to=78)
ACD30_19_18
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

16356..16724
DNA (369bp) protein (123aa)
seg (db=Seg db_id=seg from=21 to=36)
seg (db=Seg db_id=seg from=68 to=85)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
transmembrane_regions (db=TMHMM db_id=tmhmm from=63 to=85)
ACD30_19_19
GWA1_OP11_36_8, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

16724..17788
DNA (1065bp) protein (355aa)
UDP-phosphate alpha-N-acetylglucosaminyltransferase
transmembrane_regions (db=TMHMM db_id=tmhmm from=73 to=90)
transmembrane_regions (db=TMHMM db_id=tmhmm from=103 to=125)
transmembrane_regions (db=TMHMM db_id=tmhmm from=148 to=170)
ACD30_19_20
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

17755..18714
DNA (960bp) protein (320aa)
Phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase
UbiA prenyltransferase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDT5_THET1 (db=UNIREF evalue=5.0e-58 bit_score=228.0 identity=44.04 coverage=88.75)
transmembrane_regions (db=TMHMM db_id=tmhmm from=299 to=318)
transmembrane_regions (db=TMHMM db_id=tmhmm from=261 to=279)
ACD30_19_21
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

18754..18960
DNA (207bp) protein (69aa)
18754..18960 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:KKQ10033.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
ACD30_19_22
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(19044..19172)
DNA (129bp) protein (43aa)
19044..19172 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:KKQ10034.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
ACD30_19_23
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(19172..19597)
DNA (426bp) protein (142aa)
seg (db=Seg db_id=seg from=82 to=93)
PIN domain-like (db=superfamily db_id=SSF88723 from=1 to=123 evalue=2.5e-17)
PIN (db=HMMPfam db_id=PF01850 from=2 to=123 evalue=1.5e-14 interpro_id=IPR002716 interpro_description=PilT protein, N-terminal)
no description (db=Gene3D db_id=G3DSA:3.40.50.1010 from=16 to=133 evalue=1.5e-06)
ACD30_19_24
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(19594..19773)
DNA (180bp) protein (60aa)
coiled-coil (db=Coil db_id=coil from=17 to=38 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:KKQ10036.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
ACD30_19_25
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(19795..20622)
DNA (828bp) protein (276aa)
seg (db=Seg db_id=seg from=12 to=23)
seg (db=Seg db_id=seg from=240 to=251)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=27)
SH3_3 (db=HMMPfam db_id=PF08239 from=221 to=269 evalue=1.8e-10 interpro_id=IPR013247 interpro_description=SH3, type 3)
ACD30_19_26
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

20729..20986
DNA (258bp) protein (86aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=21)
seg (db=Seg db_id=seg from=27 to=47)
transmembrane_regions (db=TMHMM db_id=tmhmm from=28 to=50)
transmembrane_regions (db=TMHMM db_id=tmhmm from=55 to=77)
ACD30_19_27
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

21077..21919
DNA (843bp) protein (281aa)
metalloendopeptidase-like membrane protein
seg (db=Seg db_id=seg from=38 to=50)
seg (db=Seg db_id=seg from=236 to=246)
Duplicated hybrid motif (db=superfamily db_id=SSF51261 from=74 to=204 evalue=7.5e-29 interpro_id=IPR011055 interpro_description=Duplicated hybrid motif)
ACD30_19_28
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(21902..22501)
DNA (600bp) protein (200aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=43 to=65)
transmembrane_regions (db=TMHMM db_id=tmhmm from=70 to=92)
DUF304 (db=HMMPfam db_id=PF03703 from=92 to=163 evalue=1.0e-11 interpro_id=IPR005182 interpro_description=Protein of unknown function DUF304, transmembrane flanked domain, bacterial)
Uncharacterized protein {ECO:0000313|EMBL:KKQ10040.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
ACD30_19_29
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(22509..23705)
DNA (1197bp) protein (399aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=2 Tax=Cyanothece RepID=ISPG_CYAP7 (db=UNIREF evalue=3.0e-120 bit_score=435.0 identity=55.41 coverage=96.4912280701754)
ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl (db=HMMTigr db_id=TIGR00612 from=8 to=385 evalue=2.8e-142 interpro_id=IPR004588 interpro_description=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO=Biological Process: terpenoid biosynthetic process (GO:0016114), Molecular Function: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (GO:0046429), Biological Process: oxidation reduction (GO:0055114))
ACD30_19_30
GWA1_OP11_36_8, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(23799..25427)
DNA (1629bp) protein (543aa)
chaperonin GroEL
chaperonin GroEL
60 kDa chaperonin n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSU9_9FIRM (db=UNIREF evalue=2.0e-176 bit_score=622.0 identity=61.9 coverage=96.316758747698)
coiled-coil (db=Coil db_id=coil from=116 to=137 evalue=NA)
Displaying items 1-30 of 48 in total

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