ggKbase home page

ACD30_25

Alias: ACD30_34498.5362.10

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD30_25_1
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists


92..328
DNA (237bp) protein (79aa)
seg (db=Seg db_id=seg from=5 to=15)
seg (db=Seg db_id=seg from=64 to=78)
Ribosomal protein S20 (db=superfamily db_id=SSF46992 from=3 to=78 evalue=1.5e-12 interpro_id=IPR002583 interpro_description=Ribosomal protein S20 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_S20p (db=HMMPfam db_id=PF01649 from=4 to=76 evalue=3.8e-12 interpro_id=IPR002583 interpro_description=Ribosomal protein S20 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD30_25_2
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

398..964
DNA (567bp) protein (189aa)
seg (db=Seg db_id=seg from=41 to=56)
transmembrane_regions (db=TMHMM db_id=tmhmm from=38 to=60)
PilN (db=HMMPfam db_id=PF05137 from=42 to=173 evalue=2.0e-07 interpro_id=IPR007813 interpro_description=Fimbrial assembly)
Uncharacterized protein {ECO:0000313|EMBL:KKQ08069.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
ACD30_25_3
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

969..1571
DNA (603bp) protein (201aa)
coiled-coil (db=Coil db_id=coil from=49 to=84 evalue=NA)
seg (db=Seg db_id=seg from=29 to=38)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
PilO (db=HMMPfam db_id=PF04350 from=58 to=198 evalue=3.9e-13)
ACD30_25_4
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

1605..1850
DNA (246bp) protein (82aa)
seg (db=Seg db_id=seg from=6 to=17)
seg (db=Seg db_id=seg from=70 to=81)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
Uncharacterized protein {ECO:0000313|EMBL:KKQ08071.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
ACD30_25_5
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

1847..2776
DNA (930bp) protein (310aa)
seg (db=Seg db_id=seg from=207 to=227)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
seg (db=Seg db_id=seg from=9 to=24)
EF_HAND_1 (db=PatternScan db_id=PS00018 from=289 to=301 evalue=0.0 interpro_id=IPR018247 interpro_description=EF-Hand 1, calcium-binding site)
ACD30_25_6
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(2778..3431)
DNA (654bp) protein (218aa)
seg (db=Seg db_id=seg from=60 to=81)
seg (db=Seg db_id=seg from=2 to=13)
DNA_pol3_delta (db=HMMPfam db_id=PF06144 from=17 to=90 evalue=3.5e-07 interpro_id=IPR010372 interpro_description=DNA polymerase III, delta GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Biological Process: DNA replication (GO:0006260), Cellular Component: DNA polymerase III complex (GO:0009360))
Uncharacterized protein {ECO:0000313|EMBL:KKQ08073.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
ACD30_25_7
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(3428..4621)
DNA (1194bp) protein (398aa)
cell envelope-related transcriptional attenuator
transmembrane_regions (db=TMHMM db_id=tmhmm from=25 to=44)
seg (db=Seg db_id=seg from=26 to=39)
LytR_cpsA_psr (db=HMMPfam db_id=PF03816 from=85 to=295 evalue=1.2e-29 interpro_id=IPR004474 interpro_description=Cell envelope-related transcriptional attenuator)
ACD30_25_8
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(4625..5320)
DNA (696bp) protein (232aa)
tpiA; triosephosphate isomerase
Triosephosphate isomerase n=1 Tax=Mycoplasma flocculare RepID=TPIS_MYCFL (db=UNIREF evalue=2.0e-35 bit_score=152.0 identity=40.82 coverage=96.1206896551724)
Triosephosphate isomerase (TIM) (db=superfamily db_id=SSF51351 from=1 to=231 evalue=1.3e-55 interpro_id=IPR000652 interpro_description=Triosephosphate isomerase GO=Molecular Function: triose-phosphate isomerase activity (GO:0004807), Biological Process: metabolic process (GO:0008152))
TRIOSEPHOSPHATE ISOMERASE (db=HMMPanther db_id=PTHR21139 from=1 to=228 evalue=7.9e-53 interpro_id=IPR000652 interpro_description=Triosephosphate isomerase GO=Molecular Function: triose-phosphate isomerase activity (GO:0004807), Biological Process: metabolic process (GO:0008152))
Displaying 8 items

View Taxonomy