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ACD30_35

Alias: ACD30_20353.14009.9

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD30_35_1

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1..687
DNA (687bp) protein (229aa)
hypothetical protein
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=2 to=212 evalue=3.2e-51)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=80 to=196 evalue=9.0e-34)
UVRD / RECB / PCRA DNA HELICASE FAMILY MEMBER (db=HMMPanther db_id=PTHR11070 from=96 to=193 evalue=2.8e-33 interpro_id=IPR000212 interpro_description=DNA helicase, UvrD/REP type GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: ATP-dependent DNA helicase activity (GO:0004003), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA repair (GO:0006281))
ACD30_35_2
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

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738..1421
DNA (684bp) protein (228aa)
3D/G5 domain protein
3D/G5 domain protein n=11 Tax=Clostridium RepID=A5HXX6_CLOBH (db=UNIREF evalue=1.0e-19 bit_score=99.8 identity=37.57 coverage=71.0526315789474)
seg (db=Seg db_id=seg from=85 to=95)
seg (db=Seg db_id=seg from=41 to=63)
ACD30_35_3
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

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1430..1573
DNA (144bp) protein (48aa)
1430..1573 + (rbs_motif=TAA rbs_spacer=5bp)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_37_16_curated
ACD30_35_4
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

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1551..1820
DNA (270bp) protein (90aa)
hypothetical protein
hypothetical protein alias=ACD30_20353.14009.9G0004,ACD30_20353.14009.9_4,ACD30_C00035G00004 id=36401 tax=ACD30 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes organism_group=OP11 organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:KKQ10005.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
ACD30_35_5
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

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comp(1930..2565)
DNA (636bp) protein (212aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=63 to=75)
transmembrane_regions 5..27 Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_37_16_curated
ACD30_35_6
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

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comp(2605..3309)
DNA (705bp) protein (235aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=40 to=62)
seg (db=Seg db_id=seg from=2 to=16)
seg (db=Seg db_id=seg from=39 to=62)
Uncharacterized protein {ECO:0000313|EMBL:KKQ10007.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
ACD30_35_7
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

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3371..4318
DNA (948bp) protein (316aa)
femAB
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=106 to=273 evalue=2.9e-41 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=114 to=299 evalue=1.7e-39 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
FemAB (db=HMMPfam db_id=PF02388 from=196 to=298 evalue=2.1e-20 interpro_id=IPR003447 interpro_description=Methicillin resistance protein GO=Biological Process: peptidoglycan biosynthetic process (GO:0009252))
ACD30_35_8
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

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4318..4818
DNA (501bp) protein (167aa)
hypothetical protein
seg (db=Seg db_id=seg from=4 to=17)
seg (db=Seg db_id=seg from=128 to=138)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=23)
ACD30_35_9
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(4815..5273)
DNA (459bp) protein (153aa)
Cupin 2 conserved barrel domain protein
RmlC-like cupins (db=superfamily db_id=SSF51182 from=30 to=140 evalue=9.5e-11 interpro_id=IPR011051 interpro_description=Cupin, RmlC-type)
Cupin domain-containing protein {ECO:0000313|EMBL:KKQ10010.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
cupin 2 conserved barrel domain protein alias=ACD30_20353.14009.9G0009,ACD30_20353.14009.9_9,ACD30_C00035G00009 id=36399 tax=ACD30 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=OP11 organism_desc=OP11
ACD30_35_10
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

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comp(5305..5451)
DNA (147bp) protein (49aa)
5305..5451 - (rbs_motif=TAA rbs_spacer=10bp)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_37_16_curated
ACD30_35_11
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

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5541..6422
DNA (882bp) protein (294aa)
seg (db=Seg db_id=seg from=180 to=194)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
seg (db=Seg db_id=seg from=18 to=34)
PROKAR_NTER_METHYL (db=PatternScan db_id=PS00409 from=14 to=34 evalue=0.0 interpro_id=IPR001120 interpro_description=Prokaryotic N-terminal methylation site)
ACD30_35_12
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

6427..6936
DNA (510bp) protein (170aa)
seg (db=Seg db_id=seg from=10 to=31)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
PROKAR_NTER_METHYL (db=PatternScan db_id=PS00409 from=7 to=27 evalue=0.0 interpro_id=IPR001120 interpro_description=Prokaryotic N-terminal methylation site)
Pili subunits (db=superfamily db_id=SSF54523 from=9 to=130 evalue=5.5e-23)
ACD30_35_13
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

7243..7533
DNA (291bp) protein (97aa)
seg (db=Seg db_id=seg from=72 to=90)
Uncharacterized protein {ECO:0000313|EMBL:KKQ09851.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
ACD30_35_14
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists


7894..9015
DNA (1122bp) protein (374aa)
30S ribosomal protein S1
RIBOSOMALS1 (db=FPrintScan db_id=PR00681 from=181 to=201 evalue=1.4e-31 interpro_id=IPR000110 interpro_description=Ribosomal protein S1 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
RIBOSOMALS1 (db=FPrintScan db_id=PR00681 from=235 to=256 evalue=1.4e-31 interpro_id=IPR000110 interpro_description=Ribosomal protein S1 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
RIBOSOMALS1 (db=FPrintScan db_id=PR00681 from=313 to=332 evalue=1.4e-31 interpro_id=IPR000110 interpro_description=Ribosomal protein S1 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD30_35_15
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

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9030..10400
DNA (1371bp) protein (457aa)
DNA repair protein radA n=2 Tax=Chloroflexus RepID=A9WE37_CHLAA (db=UNIREF evalue=2.0e-124 bit_score=449.0 identity=50.87 coverage=95.8424507658643)
DNA repair protein RadA (EC:2.1.1.63)
DNA repair protein RadA (EC:2.1.1.63)
seg (db=Seg db_id=seg from=127 to=138)
ACD30_35_16
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

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comp(10390..11052)
DNA (663bp) protein (221aa)
Ribosomal_S23p (db=HMMPfam db_id=PF05635 from=36 to=130 evalue=4.6e-14 interpro_id=IPR008815 interpro_description=23S rRNA-associated protein)
Ribosomal_S23p Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_37_16_curated
CHP02436-containing protein
ACD30_35_17
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(11145..11909)
DNA (765bp) protein (255aa)
preprotein translocase subunit TatC
transmembrane_regions (db=TMHMM db_id=tmhmm from=224 to=243)
transmembrane_regions (db=TMHMM db_id=tmhmm from=30 to=52)
transmembrane_regions (db=TMHMM db_id=tmhmm from=72 to=94)
ACD30_35_18

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comp(11912..12070)
DNA (159bp) protein (53aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
tatAE: twin arginine-targeting protein trans (db=HMMTigr db_id=TIGR01411 from=4 to=50 evalue=1.1e-18 interpro_id=IPR006312 interpro_description=Twin-arginine translocation protein TatA/E GO=Cellular Component: plasma membrane (GO:0005886), Molecular Function: protein transporter activity (GO:0008565), Biological Process: protein secretion (GO:0009306), Biological Process: protein transport (GO:0015031), Cellular Component: integral to membrane (GO:0016021))
MttA_Hcf106 (db=HMMPfam db_id=PF02416 from=5 to=49 evalue=1.8e-17 interpro_id=IPR003369 interpro_description=Bacterial sec-independent translocation protein mttA/Hcf106 GO=Molecular Function: protein transporter activity (GO:0008565), Biological Process: protein transport (GO:0015031))
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD30_35_19
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(12096..12290)
DNA (195bp) protein (65aa)
seg (db=Seg db_id=seg from=40 to=55)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=13 to=22)
MttA_Hcf106 (db=HMMPfam db_id=PF02416 from=8 to=51 evalue=1.7e-08 interpro_id=IPR003369 interpro_description=Bacterial sec-independent translocation protein mttA/Hcf106 GO=Molecular Function: protein transporter activity (GO:0008565), Biological Process: protein transport (GO:0015031))
ACD30_35_20
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(12356..12550)
DNA (195bp) protein (65aa)
12356..12550 - (rbs_motif=TAA rbs_spacer=11bp)
Uncharacterized protein {ECO:0000313|EMBL:KKQ09858.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
ACD30_35_21

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12795..13466
DNA (672bp) protein (224aa)
hypothetical protein
seg (db=Seg db_id=seg from=3 to=28)
seg (db=Seg db_id=seg from=64 to=84)
seg (db=Seg db_id=seg from=173 to=219)
ACD30_35_22
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

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13488..14045
DNA (558bp) protein (186aa)
seg (db=Seg db_id=seg from=146 to=163)
seg (db=Seg db_id=seg from=80 to=100)
seg (db=Seg db_id=seg from=34 to=77)
seg (db=Seg db_id=seg from=4 to=32)
Displaying 22 items

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