ggKbase home page

ACD30_38

Alias: ACD30_31063.3904.9

Search features with annotation key words

Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD30_38_1

Not on your lists


1..828
DNA (828bp) protein (276aa)
hypothetical protein
seg (db=Seg db_id=seg from=212 to=271)
coiled-coil (db=Coil db_id=coil from=211 to=232 evalue=NA)
Ribosomal protein L25-like (db=superfamily db_id=SSF50715 from=25 to=216 evalue=9.9e-37 interpro_id=IPR011035 interpro_description=Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO=Biological Process: translation (GO:0006412))
ACD30_38_2
GWA1_OP11_36_8, Daviesbacteria, Microgenomates, Bacteria

Not on your lists


comp(879..2966)
DNA (2088bp) protein (696aa)
Valyl-tRNA synthetase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KZP2_THERP (db=UNIREF evalue=0.0 bit_score=674.0 identity=45.62 coverage=99.2816091954023)
valS; valyl-tRNA synthetase ValS (EC:6.1.1.9)
valS; valyl-tRNA synthetase ValS (EC:6.1.1.9)
AA_TRNA_LIGASE_I (db=PatternScan db_id=PS00178 from=42 to=53 evalue=0.0 interpro_id=IPR001412 interpro_description=Aminoacyl-tRNA synthetase, class I, conserved site GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: tRNA aminoacylation for protein translation (GO:0006418))
ACD30_38_3
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(3064..3381)
DNA (318bp) protein (106aa)
3064..3381 - (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_37_16_curated
ACD30_38_4
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(3472..3942)
DNA (471bp) protein (157aa)
hypothetical protein
seg (db=Seg db_id=seg from=118 to=129)
Peptidase_M22 (db=HMMPfam db_id=PF00814 from=34 to=122 evalue=3.5e-16 interpro_id=IPR000905 interpro_description=Peptidase M22, glycoprotease GO=Molecular Function: metalloendopeptidase activity (GO:0004222), Biological Process: proteolysis (GO:0006508))
O-SIALOGLYCOPROTEIN ENDOPEPTIDASE (db=HMMPanther db_id=PTHR11735 from=33 to=149 evalue=4.1e-15 interpro_id=IPR017861 interpro_description=Peptidase M22, glycoprotease, subgroup GO=Molecular Function: metalloendopeptidase activity (GO:0004222), Biological Process: proteolysis (GO:0006508))
Displaying 4 items

View Taxonomy