Alias: ACD32_57849.118798.12
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD32_3_1
uncultured bacterium, Bacteria
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Not on your lists |
1..186
|
seg (db=Seg db_id=seg from=6 to=18)
Uncharacterized protein {ECO:0000313|EMBL:EKD89993.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD32_3_2
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria
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Not on your lists |
259..873
|
preprotein translocase subunit SecA
seg (db=Seg db_id=seg from=165 to=179)
SecA_DEAD (db=HMMPfam db_id=PF07517 from=10 to=158 evalue=2.0e-54 interpro_id=IPR011115 interpro_description=SecA DEAD-like GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: membrane (GO:0016020), Biological Process: protein import (GO:0017038))
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=158 evalue=6.1e-35)
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ACD32_3_3
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria
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Not on your lists |
921..3041
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protein translocase subunit secA
protein translocase subunit secA
Protein translocase subunit secA n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C3V7_SPHTD (db=UNIREF evalue=0.0 bit_score=660.0 identity=50.42 coverage=90.6647807637907)
seg (db=Seg db_id=seg from=181 to=190)
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ACD32_3_4
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(3103..4473)
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dolichyl-phosphate-mannose-protein mannosyltransferase family protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=301 to=323)
transmembrane_regions (db=TMHMM db_id=tmhmm from=336 to=358)
seg (db=Seg db_id=seg from=4 to=18)
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WEAK ANNOTATION 30% id over 44% protein (no domain hits): Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides
Jill Banfield
(11/15/12)
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ACD32_3_5
GWF2_OP11_38_7, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(4487..6883)
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hypothetical protein
Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PVC8_9BACT (db=UNIREF evalue=3.0e-19 bit_score=101.0 identity=29.39 coverage=29.6620775969962)
transmembrane_regions (db=TMHMM db_id=tmhmm from=481 to=503)
transmembrane_regions (db=TMHMM db_id=tmhmm from=769 to=791)
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ACD32_3_6
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
6890..8425
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seg (db=Seg db_id=seg from=3 to=22)
transmembrane_regions (db=TMHMM db_id=tmhmm from=354 to=376)
transmembrane_regions (db=TMHMM db_id=tmhmm from=330 to=349)
transmembrane_regions (db=TMHMM db_id=tmhmm from=307 to=326)
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ACD32_3_7
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria
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Not on your lists |
8437..9924
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=359 to=378)
seg (db=Seg db_id=seg from=10 to=25)
seg (db=Seg db_id=seg from=165 to=175)
seg (db=Seg db_id=seg from=183 to=195)
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ACD32_3_8
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
9941..11467
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transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=342 to=360)
seg (db=Seg db_id=seg from=207 to=227)
seg (db=Seg db_id=seg from=169 to=180)
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ACD32_3_9
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria
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Not on your lists |
11568..11702
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11568..11702 + (rbs_motif=TAA rbs_spacer=12bp)
Uncharacterized protein Tax=RIFCSPHIGHO2_02_FULL_OP11_Curtissbacteria_40_16_curated
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ACD32_3_10
uncultured bacterium, Bacteria
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Not on your lists |
comp(11709..12893)
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ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
coiled-coil (db=Coil db_id=coil from=169 to=190 evalue=NA)
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase (db=superfamily db_id=SSF55874 from=253 to=391 evalue=9.9e-29 interpro_id=IPR003594 interpro_description=ATPase-like, ATP-binding domain GO=Molecular Function: ATP binding (GO:0005524))
GAF domain-like (db=superfamily db_id=SSF55781 from=33 to=178 evalue=6.4e-25)
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ACD32_3_11
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(12926..13597)
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winged helix family two component transcriptional regulator
seg (db=Seg db_id=seg from=46 to=57)
no description (db=HMMSmart db_id=SM00448 from=3 to=114 evalue=3.4e-37 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
CheY-like (db=superfamily db_id=SSF52172 from=4 to=194 evalue=3.6e-36 interpro_id=IPR011006 interpro_description=CheY-like)
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ACD32_3_12
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
14056..14883
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carbohydrate kinase
seg (db=Seg db_id=seg from=218 to=240)
seg (db=Seg db_id=seg from=35 to=48)
YJEF_C_2 (db=PatternScan db_id=PS01050 from=211 to=221 evalue=0.0 interpro_id=IPR017953 interpro_description=Carbohydrate kinase, predicted, conserved site)
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ACD32_3_13
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
14966..16405
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Glutamine synthetase n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q08N84_STIAU (db=UNIREF evalue=1.0e-175 bit_score=619.0 identity=61.81 coverage=98.125)
glnA; glutamine synthetase (EC:6.3.1.2)
glnA; glutamine synthetase (EC:6.3.1.2)
coiled-coil (db=Coil db_id=coil from=19 to=56 evalue=NA)
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ACD32_3_14
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(16492..17961)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=325 to=344)
transmembrane_regions (db=TMHMM db_id=tmhmm from=351 to=373)
seg (db=Seg db_id=seg from=4 to=19)
seg (db=Seg db_id=seg from=162 to=180)
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ACD32_3_15
GWF2_OP11_38_7, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
18024..18779
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putative F420-0--gamma-glutamyl ligase
UNCHARACTERIZED (db=HMMPanther db_id=PTHR21712 from=42 to=207 evalue=4.5e-49)
gb def: Hypothetical protein CT611 (db=HMMPanther db_id=PTHR21712:SF11 from=42 to=207 evalue=4.5e-49)
CofE-like (db=superfamily db_id=SSF144010 from=1 to=242 evalue=1.5e-41)
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ACD32_3_16
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(18798..19184)
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lactoylglutathione lyase-like lyase
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (db=superfamily db_id=SSF54593 from=1 to=127 evalue=3.5e-28)
LACTOYLGLUTATHIONE LYASE (GLYOXALASE I) (db=HMMPanther db_id=PTHR10374 from=1 to=127 evalue=1.0e-27)
no description (db=Gene3D db_id=G3DSA:3.10.180.10 from=5 to=127 evalue=1.9e-23)
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ACD32_3_17
GWF2_OP11_38_7, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(19194..20108)
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galE; UDP-glucose 4-epimerase (EC:5.1.3.2)
NAD DEPENDENT EPIMERASE/DEHYDRATASE (db=HMMPanther db_id=PTHR10366 from=5 to=304 evalue=1.3e-108)
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=1 to=304 evalue=3.3e-95)
galE: UDP-glucose 4-epimerase (db=HMMTigr db_id=TIGR01179 from=2 to=302 evalue=4.3e-72 interpro_id=IPR005886 interpro_description=UDP-glucose 4-epimerase GO=Molecular Function: UDP-glucose 4-epimerase activity (GO:0003978), Biological Process: galactose metabolic process (GO:0006012))
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ACD32_3_18
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria
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Not on your lists |
20161..21714
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=300 to=322)
transmembrane_regions (db=TMHMM db_id=tmhmm from=326 to=343)
transmembrane_regions (db=TMHMM db_id=tmhmm from=355 to=377)
seg (db=Seg db_id=seg from=10 to=22)
|
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ACD32_3_19
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(21704..22123)
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Putative uncharacterized protein n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N3I5_9BACT (db=UNIREF evalue=1.0e-26 bit_score=121.0 identity=40.58 coverage=97.1428571428571)
hypothetical protein
UPF0079 (db=HMMPfam db_id=PF02367 from=13 to=134 evalue=8.7e-34 interpro_id=IPR003442 interpro_description=Uncharacterised protein family UPF0079, ATPase bacteria)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=4 to=138 evalue=8.9e-30)
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ACD32_3_20
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(22104..23324)
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seg (db=Seg db_id=seg from=378 to=398)
seg (db=Seg db_id=seg from=348 to=360)
seg (db=Seg db_id=seg from=324 to=337)
seg (db=Seg db_id=seg from=151 to=181)
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ACD32_3_21
GWC2_OP11_40_12, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(23341..24531)
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hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
seg (db=Seg db_id=seg from=4 to=19)
coiled-coil (db=Coil db_id=coil from=34 to=69 evalue=NA)
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ACD32_3_22
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(24541..25413)
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hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=218 to=240)
transmembrane_regions (db=TMHMM db_id=tmhmm from=165 to=187)
transmembrane_regions (db=TMHMM db_id=tmhmm from=260 to=282)
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ACD32_3_23
GWC2_OP11_40_12, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(25406..26080)
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hypothetical protein
FILAMENTATION TEMPERATURE SENSITIVE CELL DIVISION PROTEIN FTSE (db=HMMPanther db_id=PTHR19222:SF36 from=2 to=222 evalue=3.4e-107)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=2 to=222 evalue=3.4e-107)
FtsE: cell division ATP-binding protein FtsE (db=HMMTigr db_id=TIGR02673 from=1 to=213 evalue=1.7e-103 interpro_id=IPR005286 interpro_description=Cell division ATP-binding protein FtsE GO=Molecular Function: ATP binding (GO:0005524), Biological Process: cell division (GO:0051301))
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ACD32_3_24
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(26123..26563)
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seg (db=Seg db_id=seg from=24 to=47)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
Uncharacterized protein {ECO:0000313|EMBL:KKR17193.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
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ACD32_3_25
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(26608..27684)
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peptide chain release factor 2
Peptide chain release factor 2 n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=RF2_THERP (db=UNIREF evalue=1.0e-77 bit_score=293.0 identity=47.14 coverage=95.8217270194986)
coiled-coil (db=Coil db_id=coil from=87 to=108 evalue=NA)
coiled-coil (db=Coil db_id=coil from=1 to=38 evalue=NA)
|
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ACD32_3_26
uncultured bacterium, Bacteria
|
Not on your lists |
27747..28049
|
putative peptidase
Peptidase_M22 (db=HMMPfam db_id=PF00814 from=35 to=89 evalue=1.1e-13 interpro_id=IPR000905 interpro_description=Peptidase M22, glycoprotease GO=Molecular Function: metalloendopeptidase activity (GO:0004222), Biological Process: proteolysis (GO:0006508))
Actin-like ATPase domain (db=superfamily db_id=SSF53067 from=1 to=91 evalue=1.9e-13)
Peptidase M22 glycoprotease {ECO:0000313|EMBL:EKD89982.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD32_3_27
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
|
Not on your lists |
28054..28926
|
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=230 to=252)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
seg (db=Seg db_id=seg from=240 to=255)
|
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ACD32_3_28
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
|
Not on your lists |
28923..29087
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
transmembrane_regions (db=TMHMM db_id=tmhmm from=34 to=53)
seg (db=Seg db_id=seg from=30 to=54)
Uncharacterized protein {ECO:0000313|EMBL:KKR17197.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
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ACD32_3_29
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
|
Not on your lists |
29096..29830
|
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KYJ6_THERP (db=UNIREF evalue=8.0e-92 bit_score=339.0 identity=66.24 coverage=96.3265306122449)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
GLUCOSE-1-PHOSPHATE THYMIDYLYLTRANSFERASE (db=HMMPanther db_id=PTHR22572:SF13 from=9 to=232 evalue=6.7e-100)
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ACD32_3_30
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
|
Not on your lists |
29827..30828
|
hypothetical protein
hypothetical protein
dTDP-glucose 4,6-dehydratase n=4 Tax=Methanosarcina RepID=Q46FX7_METBF (db=UNIREF evalue=1.0e-104 bit_score=382.0 identity=58.93 coverage=94.6107784431138)
dTDP_gluc_dehyt: dTDP-glucose 4,6-deh (db=HMMTigr db_id=TIGR01181 from=2 to=317 evalue=3.7e-185 interpro_id=IPR005888 interpro_description=dTDP-glucose 4,6-dehydratase GO=Molecular Function: dTDP-glucose 4,6-dehydratase activity (GO:0008460), Biological Process: nucleotide-sugar metabolic process (GO:0009225))
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