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ACD32_32

Alias: ACD32_48378.3979.6

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD32_32_1

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3..1328
DNA (1326bp) protein (442aa)
Excinuclease ABC subunit C
seg (db=Seg db_id=seg from=269 to=286)
coiled-coil (db=Coil db_id=coil from=221 to=242 evalue=NA)
UvrC_HhH_N (db=HMMPfam db_id=PF08459 from=280 to=426 evalue=1.4e-46 interpro_id=IPR001162 interpro_description=Excinuclease ABC, C subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: nuclease activity (GO:0004518), Biological Process: nucleotide-excision repair (GO:0006289))
ACD32_32_2
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

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1332..1733
DNA (402bp) protein (134aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=110 to=132)
transmembrane_regions (db=TMHMM db_id=tmhmm from=61 to=83)
transmembrane_regions (db=TMHMM db_id=tmhmm from=34 to=56)
seg (db=Seg db_id=seg from=43 to=66)
ACD32_32_3
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

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1771..1986
DNA (216bp) protein (72aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
transmembrane_regions (db=TMHMM db_id=tmhmm from=49 to=70)
seg (db=Seg db_id=seg from=4 to=24)
SecG (db=HMMPfam db_id=PF03840 from=4 to=67 evalue=2.2e-09 interpro_id=IPR004692 interpro_description=Preprotein translocase SecG subunit GO=Biological Process: protein secretion (GO:0009306), Molecular Function: P-P-bond-hydrolysis-driven protein transmembrane transporter activity (GO:0015450), Cellular Component: integral to membrane (GO:0016021))
ACD32_32_4
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

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1990..2844
DNA (855bp) protein (285aa)
putative periplasmic oligopeptide-binding protein of oligopeptide ABC transporter; K02035 peptide/nickel transport system substrate-binding protein (db=KEGG evalue=1.0e-09 bit_score=67.0 identity=21.55 coverage=72.280701754386)
transmembrane_regions (db=TMHMM db_id=tmhmm from=22 to=41)
seg (db=Seg db_id=seg from=265 to=277)
Periplasmic binding protein-like II (db=superfamily db_id=SSF53850 from=48 to=264 evalue=8.6e-21)
ACD32_32_5
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

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2967..3404
DNA (438bp) protein (146aa)
ABC transporter periplasmic protein
Periplasmic binding protein-like II (db=superfamily db_id=SSF53850 from=10 to=134 evalue=8.4e-14)
no description (db=Gene3D db_id=G3DSA:3.10.105.10 from=9 to=122 evalue=2.1e-10)
putative ABC transporter substrate binding protein Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_40_11_curated
ACD32_32_6
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

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comp(3401..4012)
DNA (612bp) protein (204aa)
3401..4012 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein (Fragment) Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_40_11_curated
Displaying 6 items

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