ggKbase home page

ACD32_63

Alias: ACD32p_35536.14795.12

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD32_63_1
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

70..423
DNA (354bp) protein (118aa)
coiled-coil (db=Coil db_id=coil from=20 to=62 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:KKR15804.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
ACD32_63_2
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

420..695
DNA (276bp) protein (92aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=33 to=55)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=21)
Uncharacterized protein {ECO:0000313|EMBL:KKR15805.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
ACD32_63_3
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

comp(742..1416)
DNA (675bp) protein (225aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Hippea maritima DSM 10411 RepID=F2LUY8_HIPMA (db=UNIREF evalue=4.0e-42 bit_score=174.0 identity=40.99 coverage=96.0)
Transposase IS200-like (db=superfamily db_id=SSF143422 from=79 to=160 evalue=1.1e-13 interpro_id=IPR002686 interpro_description=Transposase IS200-like GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transposase activity (GO:0004803), Biological Process: transposition, DNA-mediated (GO:0006313))
(db=HMMPfam db_id=PF01797 from=76 to=153 evalue=1.0e-09 interpro_id=IPR002686 interpro_description=Transposase IS200-like GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transposase activity (GO:0004803), Biological Process: transposition, DNA-mediated (GO:0006313))
ACD32_63_4
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(1432..2169)
DNA (738bp) protein (246aa)
1432..2169 - ( gc_cont=0.379)
Uncharacterized protein {ECO:0000313|EMBL:KKR15807.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
ACD32_63_5
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

comp(2176..2385)
DNA (210bp) protein (70aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=44 to=66)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Uncharacterized protein Tax=RIFCSPHIGHO2_02_FULL_OP11_Curtissbacteria_40_16_curated
ACD32_63_6
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria

Not on your lists


comp(2385..4208)
DNA (1824bp) protein (608aa)
DNA gyrase subunit A (EC:5.99.1.3)
GyrA/ParC C-terminal domain-like (db=superfamily db_id=SSF101904 from=292 to=606 evalue=1.2e-90)
Type II DNA topoisomerase (db=superfamily db_id=SSF56719 from=3 to=283 evalue=2.1e-70 interpro_id=IPR013760 interpro_description=DNA topoisomerase, type IIA, central GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA topoisomerase (ATP-hydrolyzing) activity (GO:0003918), Molecular Function: ATP binding (GO:0005524), Cellular Component: chromosome (GO:0005694), Biological Process: DNA topological change (GO:0006265))
(db=HMMPfam db_id=PF00521 from=1 to=264 evalue=8.4e-60 interpro_id=IPR002205 interpro_description=DNA topoisomerase, type IIA, subunit A/C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA topoisomerase (ATP-hydrolyzing) activity (GO:0003918), Molecular Function: ATP binding (GO:0005524), Cellular Component: chromosome (GO:0005694), Biological Process: DNA topological change (GO:0006265))
ACD32_63_7
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(5093..5707)
DNA (615bp) protein (205aa)
purine phosphoribosyltransferase
PRTase-like (db=superfamily db_id=SSF53271 from=14 to=159 evalue=1.6e-27)
no description (db=Gene3D db_id=G3DSA:3.40.50.2020 from=14 to=163 evalue=3.5e-27)
(db=HMMPfam db_id=PF00156 from=21 to=137 evalue=2.8e-18 interpro_id=IPR000836 interpro_description=Phosphoribosyltransferase GO=Biological Process: nucleoside metabolic process (GO:0009116))
ACD32_63_8
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(5704..6774)
DNA (1071bp) protein (357aa)
ddl; D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=DDL_DESAD (db=UNIREF evalue=2.0e-43 bit_score=180.0 identity=37.37 coverage=81.5126050420168)
(db=HMMPfam db_id=PF07478 from=174 to=354 evalue=1.5e-40 interpro_id=IPR011095 interpro_description=D-alanine--D-alanine ligase, C-terminal GO=Molecular Function: D-alanine-D-alanine ligase activity (GO:0008716))
Glutathione synthetase ATP-binding domain-like (db=superfamily db_id=SSF56059 from=158 to=354 evalue=3.0e-37)
ACD32_63_9
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

comp(7292..7528)
DNA (237bp) protein (79aa)
MurD-like peptide ligases, peptide-binding domain (db=superfamily db_id=SSF53244 from=3 to=75 evalue=3.9e-09 interpro_id=IPR004101 interpro_description=Mur ligase, C-terminal GO=Molecular Function: ATP binding (GO:0005524), Biological Process: biosynthetic process (GO:0009058), Molecular Function: ligase activity (GO:0016874))
UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE (db=HMMPanther db_id=PTHR23135:SF2 from=37 to=76 evalue=8.6e-09 interpro_id=IPR005762 interpro_description=UDP-N-acetylmuramoylalanine-D-glutamate ligase GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: regulation of cell shape (GO:0008360), Molecular Function: UDP-N-acetylmuramoylalanine-D-glutamate ligase activity (GO:0008764), Biological Process: cell division (GO:0051301))
MUR LIGASE FAMILY MEMBER (db=HMMPanther db_id=PTHR23135 from=37 to=76 evalue=8.6e-09)
no description (db=Gene3D db_id=G3DSA:3.90.190.20 from=3 to=75 evalue=9.1e-07 interpro_id=IPR004101 interpro_description=Mur ligase, C-terminal GO=Molecular Function: ATP binding (GO:0005524), Biological Process: biosynthetic process (GO:0009058), Molecular Function: ligase activity (GO:0016874))
ACD32_63_10
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(7537..8688)
DNA (1152bp) protein (384aa)
murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
seg (db=Seg db_id=seg from=206 to=217)
seg (db=Seg db_id=seg from=357 to=374)
coiled-coil (db=Coil db_id=coil from=352 to=357 evalue=NA)
ACD32_63_11
GWC2_OP11_40_12, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(8678..9298)
DNA (621bp) protein (207aa)
phosphoglycerate mutase
transmembrane_regions (db=TMHMM db_id=tmhmm from=144 to=166)
PG_MUTASE (db=PatternScan db_id=PS00175 from=13 to=22 evalue=0.0 interpro_id=IPR001345 interpro_description=Phosphoglycerate/bisphosphoglycerate mutase, active site GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
PHOSPHOGLYCERATE MUTASE (db=HMMPanther db_id=PTHR23029 from=9 to=202 evalue=3.1e-47)
ACD32_63_12
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

9320..10120
DNA (801bp) protein (267aa)
glutamate racemase
ASP_GLU_RACEMASE_2 (db=PatternScan db_id=PS00924 from=180 to=190 evalue=0.0 interpro_id=IPR018187 interpro_description=Asp/Glu racemase, active site GO=Molecular Function: racemase and epimerase activity, acting on amino acids and derivatives (GO:0016855))
glut_race: glutamate racemase (db=HMMTigr db_id=TIGR00067 from=6 to=254 evalue=2.0e-90 interpro_id=IPR004391 interpro_description=Glutamate racemase GO=Molecular Function: glutamate racemase activity (GO:0008881), Biological Process: peptidoglycan biosynthetic process (GO:0009252))
GLUTAMATE RACEMASE (db=HMMPanther db_id=PTHR21198 from=1 to=263 evalue=2.0e-82)
ACD32_63_13
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

comp(10107..11414)
DNA (1308bp) protein (436aa)
murC; UDP-N-acetylmuramate--L-alanine ligase (UDP-N-acetylmuramoyl-L-alanine synthetase) (EC:6.3.2.8)
seg (db=Seg db_id=seg from=11 to=22)
murC: UDP-N-acetylmuramate--alanine ligase (db=HMMTigr db_id=TIGR01082 from=4 to=431 evalue=1.7e-109 interpro_id=IPR005758 interpro_description=UDP-N-acetylmuramate-alanine ligase GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: regulation of cell shape (GO:0008360), Molecular Function: UDP-N-acetylmuramate-L-alanine ligase activity (GO:0008763), Biological Process: cell division (GO:0051301))
UDP-N-ACETYLMURAMATE--L-ALANINE LIGASE (db=HMMPanther db_id=PTHR23135:SF5 from=116 to=431 evalue=1.4e-90)
ACD32_63_14
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(11417..12514)
DNA (1098bp) protein (366aa)
Phosphoserine aminotransferase n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11WE4_CYTH3 (db=UNIREF evalue=2.0e-81 bit_score=306.0 identity=43.22 coverage=96.448087431694)
serC; phosphoserine aminotransferase (EC:2.6.1.52)
serC; phosphoserine aminotransferase (EC:2.6.1.52)
PLP-dependent transferases (db=superfamily db_id=SSF53383 from=6 to=365 evalue=2.1e-55 interpro_id=IPR015424 interpro_description=Pyridoxal phosphate-dependent transferase, major domain)
ACD32_63_15

Not on your lists

comp(12622..14511)
DNA (1890bp) protein (630aa)
D-3-phosphoglycerate dehydrogenase
D-3-phosphoglycerate dehydrogenase
HAD-superfamily hydrolase, subfamily IB (PSPase-like) n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W4R7_DYAFD (db=UNIREF evalue=0.0 bit_score=676.0 identity=55.89 coverage=99.5238095238095)
seg (db=Seg db_id=seg from=59 to=68)
ACD32_63_16
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

comp(14636..14833)
DNA (198bp) protein (66aa)
hypothetical protein
DNA GYRASE SUBUNIT B (db=HMMPanther db_id=PTHR10169:SF3 from=1 to=59 evalue=5.9e-30)
DNA TOPOISOMERASE/GYRASE (db=HMMPanther db_id=PTHR10169 from=1 to=59 evalue=5.9e-30)
(db=HMMPfam db_id=PF00986 from=1 to=55 evalue=1.0e-28 interpro_id=IPR002288 interpro_description=DNA topoisomerase, type IIA, subunit B, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA topoisomerase (ATP-hydrolyzing) activity (GO:0003918), Molecular Function: ATP binding (GO:0005524), Cellular Component: chromosome (GO:0005694), Biological Process: DNA topological change (GO:0006265))
Displaying 16 items

View Taxonomy