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SCNpilot_cont_500_bf_scaffold_2151

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2151_1
Candidatus Saccharimonas aalborgensis, Candidatus Saccharimonas, Candidatus Saccharibacteria, Bacteria

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3..548
DNA (546bp) protein (182aa)
putative Serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Putative Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:AGL62658.1}; EC=3.4.16.4 {ECO:0000313|EMBL:AGL62658.1};; TaxID=1332188 species="Bacteria; Candidatus Saccharibacteria; Candidatus Saccharimonas.;" source="Candidatus Saccharimonas aalborgensis.;"
Putative Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PLY3_9BACT
SCNpilot_cont_500_bf_scaffold_2151_2
unknown

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comp(615..1169)
DNA (555bp) protein (185aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2151_3
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

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1385..1702
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RWK8_9BACT
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
rpsJ; ribosomal protein S10 (BS13)
SCNpilot_cont_500_bf_scaffold_2151_4
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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comp(1765..2085)
DNA (321bp) protein (107aa)
id=2441157 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_2151_5
unknown

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2383..2475
DNA (93bp) protein (31aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2151_6
Candidatus Saccharibacteria oral taxon TM7x, Candidatus Saccharibacteria, Bacteria

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2447..2968
DNA (522bp) protein (174aa)
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1476577 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria oral taxon TM7x.;"
50S ribosomal protein L3 id=4440494 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
rplC; ribosomal protein L3 (BL3)
SCNpilot_cont_500_bf_scaffold_2151_7
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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2968..3582
DNA (615bp) protein (205aa)
50S ribosomal protein L4 id=2441130 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
rplD; 50S ribosomal protein L4
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_2151_8
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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3584..3910
DNA (327bp) protein (109aa)
50S ribosomal protein L23 id=2441124 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
rplW; 50S ribosomal subunit protein L23
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_2151_9
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

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3910..4749
DNA (840bp) protein (280aa)
Ribosomal protein L2 n=1 Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RYC3_9BACT
rplB; ribosomal protein L2 (BL2)
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_cont_500_bf_scaffold_2151_10
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

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4751..5017
DNA (267bp) protein (89aa)
Ribosomal protein S19 id=4440490 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
Ribosomal protein S19 {ECO:0000313|EMBL:KKW05215.1}; TaxID=1619071 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9.;"
rpsS; ribosomal protein S19 (BS19)
SCNpilot_cont_500_bf_scaffold_2151_11
Candidatus Saccharibacteria oral taxon TM7x, Candidatus Saccharibacteria, Bacteria

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5017..5487
DNA (471bp) protein (157aa)
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1476577 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria oral taxon TM7x.;"
50S ribosomal protein L22 id=2441108 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
rplV; 50S ribosomal protein L22
SCNpilot_cont_500_bf_scaffold_2151_12
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

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5487..6119
DNA (633bp) protein (211aa)
30S ribosomal protein S3 n=1 Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RVW1_9BACT
rpsC; ribosomal protein S3 (BS3)
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
SCNpilot_cont_500_bf_scaffold_2151_13
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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6125..6538
DNA (414bp) protein (138aa)
50S ribosomal protein L16 id=2441102 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
rplP; ribosomal protein L16
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_2151_14
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

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6538..6774
DNA (237bp) protein (79aa)
50S ribosomal protein L29 n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PM44_9BACT
rpmC; ribosomal protein L29
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_cont_500_bf_scaffold_2151_15
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

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6776..7063
DNA (288bp) protein (96aa)
30S ribosomal protein S17 n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PY64_9BACT
rpsQ; 30S ribosomal protein S17
Tax=CG_TM7_01
SCNpilot_cont_500_bf_scaffold_2151_16
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

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7065..7433
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RWJ3_9BACT
rplNA; ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
SCNpilot_cont_500_bf_scaffold_2151_17
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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7435..7755
DNA (321bp) protein (107aa)
50S ribosomal protein L24 id=2441093 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
rplX; 50S ribosomal protein L24
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_2151_18
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

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7755..8300
DNA (546bp) protein (182aa)
50S ribosomal protein L5 id=4440482 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
50S ribosomal protein L5 {ECO:0000313|EMBL:KKW05207.1}; TaxID=1619071 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9.;"
rplE; ribosomal protein L5 (BL6)
SCNpilot_cont_500_bf_scaffold_2151_19
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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8300..8569
DNA (270bp) protein (90aa)
30S ribosomal protein S14 id=2440953 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
rpsN; 30S ribosomal subunit protein S14
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_2151_20
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists


8587..8988
DNA (402bp) protein (134aa)
30S ribosomal protein S8 id=2440952 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
rpsH; ribosomal protein S8 (BS8)
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_cont_500_bf_scaffold_2151_21
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

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9065..10063
DNA (999bp) protein (333aa)
Putative hydrolase/esterase n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UYM8_9ACTO
lpqC; polyhydroxybutyrate depolymerase
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
SCNpilot_cont_500_bf_scaffold_2151_22
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

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10205..10738
DNA (534bp) protein (178aa)
50S ribosomal protein L6P; K02933 large subunit ribosomal protein L6 id=5226681 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
rplF; ribosomal protein L6 (BL8)
SCNpilot_cont_500_bf_scaffold_2151_23
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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10741..11094
DNA (354bp) protein (118aa)
50S ribosomal protein L18 id=2440950 bin=GWC2_TM7_44_17 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
rplR; ribosomal protein L18
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_2151_24
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists


11096..11704
DNA (609bp) protein (203aa)
ribosomal protein S5, partial id=2440949 bin=GWC2_TM7_44_17 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
rpsE; 30S ribosomal subunit protein S5
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_2151_25
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

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11704..12186
DNA (483bp) protein (161aa)
ribosomal protein L15 id=2440948 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
rplO; ribosomal protein L15
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
SCNpilot_cont_500_bf_scaffold_2151_26
unknown

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comp(12386..12583)
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2151_27
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

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12713..14128
DNA (1416bp) protein (472aa)
Preprotein translocase subunit SecY, nonfunctional n=1 Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RW48_9BACT
secY; preprotein translocase subunit rbh
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_cont_500_bf_scaffold_2151_28
unknown

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14214..14597
DNA (384bp) protein (128aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2151_29
unknown

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14782..15318
DNA (537bp) protein (179aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2151_30
Candidatus Saccharimonas aalborgensis, Candidatus Saccharimonas, Candidatus Saccharibacteria, Bacteria

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15594..15797
DNA (204bp) protein (68aa)
Translation initiation factor IF-1 n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PM28_9BACT
infA; initiation factor IF-I
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1332188 species="Bacteria; Candidatus Saccharibacteria; Candidatus Saccharimonas.;" source="Candidatus Saccharimonas aalborgensis.;"
Displaying items 1-30 of 44 in total

View Taxonomy