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SCNpilot_cont_500_bf_scaffold_693

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_693_1
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58..1206)
DNA (1149bp) protein (383aa)
Glycosyl transferase family 2 n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M558_GEODF
family 2 glycosyl transferase
Glycosyltransferase {ECO:0000313|EMBL:ACM19813.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
SCNpilot_cont_500_bf_scaffold_693_2
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1213..4239)
DNA (3027bp) protein (1009aa)
Glycosyltransferase sugar-binding region containing DXD motif family protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H3J4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ21795.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_693_3
Brachyspira hampsonii, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(4223..6649)
DNA (2427bp) protein (809aa)
Glycosyl transferase n=1 Tax=Brachyspira hampsonii 30446 RepID=L0X0K3_9SPIR rbh
Glycosyl transferase {ECO:0000313|EMBL:EKV56320.1}; TaxID=1289135 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira.;" source="Brachyspira hampsonii 30446.;"
glycosyl transferase rbh
SCNpilot_cont_500_bf_scaffold_693_4
WS6_GWC1_33_20, WS6, Bacteria

Not on your lists

comp(6716..7813)
DNA (1098bp) protein (366aa)
UDP-N-acetylglucosamine 2-epimerase; K01791 UDP-N-acetylglucosamine 2-epimerase [EC:5.1.3.14] id=5100228 bin=WS6_GWC1_33_20 species=WS6_GWE1_33_547 genus=WS6_GWE1_33_547 taxon_order=WS6_GWE1_33_547 taxon_class=WS6_GWE1_33_547 phylum=WS6 tax=WS6_GWC1_33_20 organism_group=WS6 (Doikabacteria) rbh
UDP-N-acetylglucosamine 2-epimerase, UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:KKP43491.1}; EC=5.1.3.14 {ECO:0000313|EMBL:KKP43491.1};; TaxID=1619089 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC1_33_20.;"
UDP-N-acetylglucosamine 2-epimerase rbh
SCNpilot_cont_500_bf_scaffold_693_5
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

comp(7823..8677)
DNA (855bp) protein (285aa)
reductase; K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] id=5100227 bin=WS6_GWC1_33_20 species=WS6_GWF1_33_233 genus=WS6_GWF1_33_233 taxon_order=WS6_GWF1_33_233 taxon_class=WS6_GWF1_33_233 phylum=WS6 tax=WS6_GWC1_33_20 organism_group=WS6 (Doikabacteria) rbh
Reductase, dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:KKP44761.1}; EC=1.1.1.133 {ECO:0000313|EMBL:KKP44761.1};; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
reductase; K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
SCNpilot_cont_500_bf_scaffold_693_6
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

comp(8674..9675)
DNA (1002bp) protein (334aa)
hypothetical protein id=5100226 bin=WS6_GWC1_33_20 species=WS6_GWF1_33_233 genus=WS6_GWF1_33_233 taxon_order=WS6_GWF1_33_233 taxon_class=WS6_GWF1_33_233 phylum=WS6 tax=WS6_GWC1_33_20 organism_group=WS6 (Doikabacteria) rbh
Uncharacterized protein {ECO:0000313|EMBL:KKP44760.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
Capsular polysaccharide biosynthesis protein CapD rbh
SCNpilot_cont_500_bf_scaffold_693_7
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(9738..10886)
DNA (1149bp) protein (383aa)
Polysaccharide export ATP-binding protein id=4376435 bin=GWC2_TM7_48_9 species=Streptococcus iniae genus=Streptococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
sugar ABC transporter ATP-binding protein; K01990 ABC-2 type transport system ATP-binding protein
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
SCNpilot_cont_500_bf_scaffold_693_8
Candidatus Saccharibacteria oral taxon TM7x, Candidatus Saccharibacteria, Bacteria

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comp(10886..11677)
DNA (792bp) protein (264aa)
polysaccharide permease n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B2499
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1476577 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria oral taxon TM7x.;"
ABC transporter
SCNpilot_cont_500_bf_scaffold_693_9
RHI_OP11_45_10, Microgenomates, Bacteria

Not on your lists

11726..12868
DNA (1143bp) protein (381aa)
glycosyl transferase group 1 protein (EC:2.4.1.-) id=5802273 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
lipopolysaccharide biosynthesis protein
Tax=RIFCSPHIGHO2_12_FULL_OP11_45_10_curated
SCNpilot_cont_500_bf_scaffold_693_10
Candidatus Saccharimonas aalborgensis, Candidatus Saccharimonas, Candidatus Saccharibacteria, Bacteria

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12868..14001
DNA (1134bp) protein (378aa)
Putative glycosyl transferase group 1 n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PVG1_9BACT rbh
putative glycosyl transferase group 1 rbh
Putative glycosyl transferase group 1 {ECO:0000313|EMBL:AGL62215.1}; TaxID=1332188 species="Bacteria; Candidatus Saccharibacteria; Candidatus Saccharimonas.;" source="Candidatus Saccharimonas aalborgensis.;"
SCNpilot_cont_500_bf_scaffold_693_11
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

13998..15068
DNA (1071bp) protein (357aa)
sucC; succinyl-CoA synthetase (beta subunit) (EC:6.2.1.5) rbh
succinyl-CoA synthetase subunit beta id=4041255 bin=GWC2_TM7_44_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
SCNpilot_cont_500_bf_scaffold_693_12
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

15061..15918
DNA (858bp) protein (286aa)
sucD; succinyl-CoA synthetase (alpha subunit) (EC:6.2.1.5) rbh
succinyl-CoA synthetase, alpha subunit id=4041256 bin=GWC2_TM7_44_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
SCNpilot_cont_500_bf_scaffold_693_13
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

15935..16894
DNA (960bp) protein (320aa)
hypothetical protein cdiviTM7_00995 id=4041258 bin=GWC2_TM7_44_17 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
Glycosyltransferase
Tax=CG_TM7_01
SCNpilot_cont_500_bf_scaffold_693_14
Candidatus Saccharibacteria oral taxon TM7x, Candidatus Saccharibacteria, Bacteria

Not on your lists

16857..17282
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B22BC
Sugar translocase {ECO:0000313|EMBL:AJA06668.1}; TaxID=1476577 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria oral taxon TM7x.;"
membrane protein of unknown function
SCNpilot_cont_500_bf_scaffold_693_15
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

17286..18386
DNA (1101bp) protein (367aa)
Glycosyl transferase, group 1 id=4041259 bin=GWC2_TM7_44_17 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Glycosyl transferase, group 1
Tax=CG_TM7_01
SCNpilot_cont_500_bf_scaffold_693_16
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(18401..18862)
DNA (462bp) protein (154aa)
spoIIIJ-associated protein id=4041260 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Single-stranded nucleic acid binding R3H domain protein
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_cont_500_bf_scaffold_693_17
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(18862..19836)
DNA (975bp) protein (325aa)
60 kDa inner membrane insertion protein n=1 Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RX19_9BACT rbh
putative 60 kDa inner membrane insertion protein
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_cont_500_bf_scaffold_693_18
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(19872..20231)
DNA (360bp) protein (120aa)
putative Ribonuclease P (EC:3.1.26.5)
hypothetical protein cdiviTM7_00980 id=4041262 bin=GWC2_TM7_44_17 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_693_19
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

20753..22141
DNA (1389bp) protein (463aa)
chromosomal replication initiation protein id=4041263 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
dnaA; chromosomal replication initiator protein DnaA
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_cont_500_bf_scaffold_693_20
unknown

Not on your lists

22134..22400
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_693_21
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

22425..23525
DNA (1101bp) protein (367aa)
dnaN; DNA polymerase III (beta subunit) (EC:2.7.7.7)
DNA polymerase III, beta subunit id=4376425 bin=GWC2_TM7_48_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good rbh
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_cont_500_bf_scaffold_693_22
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

23532..24572
DNA (1041bp) protein (347aa)
DNA replication and repair protein RecF id=4041266 bin=GWC2_TM7_44_17 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
recF; DNA repair and genetic recombination factor
Tax=CG_TM7_01
SCNpilot_cont_500_bf_scaffold_693_23
unknown

Not on your lists

comp(24569..25198)
DNA (630bp) protein (210aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_693_24
unknown

Not on your lists

comp(25198..26592)
DNA (1395bp) protein (465aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_693_25
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

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comp(26606..29611)
DNA (3006bp) protein (1002aa)
transmembrane_regions id=5226244 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHB42180.1}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
SCNpilot_cont_500_bf_scaffold_693_26
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(29633..31480)
DNA (1848bp) protein (616aa)
id=5226245 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7 rbh
Type IV secretory pathway VirB4 components-like protein rbh
Tax=CG_TM7_01
SCNpilot_cont_500_bf_scaffold_693_27
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(31480..32391)
DNA (912bp) protein (304aa)
id=5226246 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7 rbh
hypothetical protein rbh
Tax=CG_TM7_01
SCNpilot_cont_500_bf_scaffold_693_28
Candidatus Saccharimonas aalborgensis, Candidatus Saccharimonas, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(32430..33536)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PYF3_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGL62236.1}; TaxID=1332188 species="Bacteria; Candidatus Saccharibacteria; Candidatus Saccharimonas.;" source="Candidatus Saccharimonas aalborgensis.;"
SCNpilot_cont_500_bf_scaffold_693_29
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(33550..37386)
DNA (3837bp) protein (1279aa)
Uncharacterized protein n=1 Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RUL5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AHB42186.1}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
membrane protein of unknown function
SCNpilot_cont_500_bf_scaffold_693_30
unknown

Not on your lists

comp(37439..38362)
DNA (924bp) protein (308aa)

This feature has no annotations

Displaying items 1-30 of 64 in total

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