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SCNpilot_cont_500_bf_scaffold_1212

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1212_1
unknown

Not on your lists

3..113
DNA (111bp) protein (37aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1212_2
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(447..881)
DNA (435bp) protein (145aa)
acid phosphatase/vanadium-dependent haloperoxidase related protein id=4042141 bin=GWC2_TM7_44_17 species=candidate division TM7 single-cell isolate TM7a genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
putative integral membrane protein
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
SCNpilot_cont_500_bf_scaffold_1212_3
Candidatus Saccharimonas aalborgensis, Candidatus Saccharimonas, Candidatus Saccharibacteria, Bacteria

Not on your lists


comp(885..3425)
DNA (2541bp) protein (847aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1332188 species="Bacteria; Candidatus Saccharibacteria; Candidatus Saccharimonas.;" source="Candidatus Saccharimonas aalborgensis.;"
gyrA; DNA gyrase (subunit A) (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PVW2_9BACT
SCNpilot_cont_500_bf_scaffold_1212_4
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(3443..5356)
DNA (1914bp) protein (638aa)
gyrB; DNA gyrase (subunit B) (EC:5.99.1.3)
Gyrase subunit B protein {ECO:0000313|EMBL:KKW04390.1}; TaxID=1619071 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9.;"
DNA gyrase subunit B id=4893595 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
SCNpilot_cont_500_bf_scaffold_1212_5
Candidatus Saccharibacteria oral taxon TM7x, Candidatus Saccharibacteria, Bacteria

Not on your lists

5609..7165
DNA (1557bp) protein (519aa)
Uncharacterized protein n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PLC2_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:AJA06719.1}; TaxID=1476577 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria oral taxon TM7x.;"
exported protein of unknown function rbh
SCNpilot_cont_500_bf_scaffold_1212_6
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

Not on your lists

7165..7761
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RXL7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AHB42344.1}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1212_7
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(7826..10771)
DNA (2946bp) protein (982aa)
Uncharacterized protein n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KS42_9BACT rbh
hypothetical protein rbh
Tax=CG_TM7_01
SCNpilot_cont_500_bf_scaffold_1212_8
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(10801..11232)
DNA (432bp) protein (144aa)
Putative uncharacterized protein id=4042050 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
hypothetical protein
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_1212_9
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(11351..11680)
DNA (330bp) protein (110aa)
hypothetical protein cdiviTM7_00386 id=4042048 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
membrane protein of unknown function
Tax=CG_TM7_01
SCNpilot_cont_500_bf_scaffold_1212_10
RHI_Saccharibacteria_42_8, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(12625..13062)
DNA (438bp) protein (146aa)
Type II secretion system protein G id=4041403 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
type II secretion system protein G; K02456 general secretion pathway protein G
Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_42_8_curated
SCNpilot_cont_500_bf_scaffold_1212_11
unknown

Not on your lists

comp(13260..13685)
DNA (426bp) protein (142aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1212_12
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

14085..15614
DNA (1530bp) protein (510aa)
id=5226403 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7 rbh
putative bifunctional enzyme and transcriptional regulator
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_cont_500_bf_scaffold_1212_13
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(15611..16084)
DNA (474bp) protein (158aa)
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
SCNpilot_cont_500_bf_scaffold_1212_14
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

16363..16785
DNA (423bp) protein (141aa)
translation initiation factor IF-3 id=4042045 bin=GWC2_TM7_44_17 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
infC; initiation factor IF-3
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
SCNpilot_cont_500_bf_scaffold_1212_15
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

16797..16991
DNA (195bp) protein (65aa)
hypothetical protein cdiviTM7_00366 id=4042044 bin=GWC2_TM7_44_17 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
rpmI; 50S ribosomal protein L35
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_1212_16
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists


17036..17380
DNA (345bp) protein (115aa)
50S ribosomal protein L20 id=4042043 bin=GWC2_TM7_44_17 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
rplT; ribosomal protein L20
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
SCNpilot_cont_500_bf_scaffold_1212_17
Candidatus Saccharimonas aalborgensis, Candidatus Saccharimonas, Candidatus Saccharibacteria, Bacteria

Not on your lists

17452..18840
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PZC2_9BACT rbh
membrane protein of unknown function rbh
Uncharacterized protein {ECO:0000313|EMBL:AGL62606.1}; TaxID=1332188 species="Bacteria; Candidatus Saccharibacteria; Candidatus Saccharimonas.;" source="Candidatus Saccharimonas aalborgensis.;"
SCNpilot_cont_500_bf_scaffold_1212_18
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(19304..20218)
DNA (915bp) protein (305aa)
Ribonuclease H id=4042042 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
bifunctional RNase H/acid phosphatase
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_1212_19
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(20523..21197)
DNA (675bp) protein (225aa)
putative zinc metalloprotease ywhC (EC:3.4.24.-)
Zn-dependent membrane-bound protease, M50 family protein id=4042041 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_1212_20
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(21201..23564)
DNA (2364bp) protein (788aa)
RNA helicase id=4358145 bin=GWC2_TM7_44_17 species=Aegilops tauschii genus=Aegilops taxon_order=Poales taxon_class=Liliopsida phylum=Streptophyta tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
hypothetical protein rbh
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_1212_21
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

23641..24600
DNA (960bp) protein (320aa)
Fibronectin type III domain protein id=3963996 bin=GWC2_Ignavibacteria_38_9 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
exported protein of unknown function
Tax=CG_TM7_01
SCNpilot_cont_500_bf_scaffold_1212_22
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

24699..24893
DNA (195bp) protein (65aa)
hypothetical protein cdiviTM7_00351 id=4042038 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
rpmB; ribosomal protein L28
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_1212_23
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(24945..25382)
DNA (438bp) protein (146aa)
dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase Dut id=4694124 bin=GWC2_TM7_48_9 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_cont_500_bf_scaffold_1212_24
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(25423..26058)
DNA (636bp) protein (212aa)
Zn-dependent hydrolase of the beta-lactamase fold-like protein id=4042037 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
hypothetical protein
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_1212_25
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(26088..26696)
DNA (609bp) protein (203aa)
probable transcriptional regulator id=4042036 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
hypothetical protein
Tax=CG_TM7_01
SCNpilot_cont_500_bf_scaffold_1212_26
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(26878..27777)
DNA (900bp) protein (300aa)
putative tRNA dimethylallyltransferase (EC:2.5.1.75)
miaA id=4042035 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_1212_27
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(27779..28102)
DNA (324bp) protein (108aa)
putative 6-O-methylguanine DNA methyltransferase id=5226393 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
Uncharacterized protein {ECO:0000313|EMBL:AHB42329.1}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
putative Methylated-DNA-(Protein)-cysteine S-methyltransferase DNA binding protein
SCNpilot_cont_500_bf_scaffold_1212_28
RHI_Saccharibacteria_47_17, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(28083..28646)
DNA (564bp) protein (188aa)
Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_47_17_curated
SCNpilot_cont_500_bf_scaffold_1212_29
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(28647..30464)
DNA (1818bp) protein (606aa)
thrZ; threonyl-tRNA synthetase (EC:6.1.1.3)
threonyl-tRNA synthetase id=4042033 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_500_bf_scaffold_1212_30
Geobacillus stearothermophilus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(30689..31072)
DNA (384bp) protein (128aa)
DNA-directed RNA polymerase subunit omega {ECO:0000313|EMBL:EZP74999.1}; TaxID=1295642 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus stearothermophilus NUB3621.;"
Displaying items 1-30 of 49 in total

View Taxonomy