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SCNpilot_cont_750_bf_scaffold_2166

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_2166_1
Listeria rocourtiae, Listeria, Bacillales, Bacilli, Firmicutes, Bacteria

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1..1380
DNA (1380bp) protein (460aa)
Membrane protein n=1 Tax=Pediococcus pentosaceus SL4 RepID=U5ZIT7_PEDPE
YhgE/Pip domain-containing protein {ECO:0000313|EMBL:EUJ43830.1}; TaxID=1265846 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.;" source="Listeria rocourtiae FSL F6-920.;"
hypothetical protein; K01421 putative membrane protein
SCNpilot_cont_750_bf_scaffold_2166_2
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1468..1815)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Prevotella multisaccharivorax DSM 17128 RepID=F8N8X1_9BACT
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30708.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_2166_3
Bifidobacterium asteroides, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1831..2457)
DNA (627bp) protein (209aa)
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097343}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097340};; TaxID=1684 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium asteroides.;"
DNA-3-methyladenine glycosylase (EC:3.2.2.21)
hypothetical protein n=1 Tax=Pseudoclavibacter faecalis RepID=UPI000372E285
SCNpilot_cont_750_bf_scaffold_2166_4
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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comp(2743..3246)
DNA (504bp) protein (168aa)
id=2445610 bin=GWC2_TM7_44_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_750_bf_scaffold_2166_5
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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comp(3240..3683)
DNA (444bp) protein (148aa)
Chaperone protein clpB id=2445596 bin=GWC2_TM7_44_17 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
clpB; ATP-dependent chaperone ClpB
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_750_bf_scaffold_2166_6
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(3812..4237)
DNA (426bp) protein (142aa)
Heat shock protein Hsp20 family protein id=2445608 bin=GWC2_TM7_44_17 species=Corynebacterium glucuronolyticum genus=Corynebacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
hsp20; molecular chaperone (small heat shock protein); K13993 HSP20 family protein
Tax=GWC2_TM7_44_17_curated
SCNpilot_cont_750_bf_scaffold_2166_7
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(4442..4960)
DNA (519bp) protein (173aa)
glutathionylspermidine synthase (EC:6.3.1.8) id=7201154 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
hypothetical protein
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_cont_750_bf_scaffold_2166_8
R_RIF_OD1_11_46_22, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(5612..6331)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PKU0_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_11_46_22_curated
SCNpilot_cont_750_bf_scaffold_2166_9
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

Not on your lists

6682..7134
DNA (453bp) protein (151aa)
id=4854914 bin=GWC2_TM7_48_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
Uncharacterized protein {ECO:0000313|EMBL:KKW04882.1}; TaxID=1619071 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9.;"
SCNpilot_cont_750_bf_scaffold_2166_10
unknown

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comp(7118..7834)
DNA (717bp) protein (239aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_2166_11
Formosa sp. AK20, Formosa, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(7911..8612)
DNA (702bp) protein (234aa)
Type III restriction system endonuclease, putative n=1 Tax=Formosa sp. AK20 RepID=M7MFG7_9FLAO
Type III restriction system endonuclease, putative {ECO:0000313|EMBL:EMQ93806.1}; TaxID=1137281 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Formosa.;" source="Formosa sp. AK20.;"
type III restriction system endonuclease
SCNpilot_cont_750_bf_scaffold_2166_12
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

comp(8593..10329)
DNA (1737bp) protein (579aa)
Uncharacterized protein n=1 Tax=Capnocytophaga canimorsus (strain 5) RepID=F9YUX8_CAPCC
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
SCNpilot_cont_750_bf_scaffold_2166_13
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(10331..11854)
DNA (1524bp) protein (508aa)
adenine-specific DNA-methyltransferase (EC:2.1.1.72); K00571 site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] rbh
Site-specific DNA-methyltransferase (Adenine-specific) n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZW05_DESOH rbh
Tax=CG_Pacearch_05
SCNpilot_cont_750_bf_scaffold_2166_14
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11847..12545)
DNA (699bp) protein (233aa)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WKL0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EGX68955.1}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
SCNpilot_cont_750_bf_scaffold_2166_15
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

Not on your lists

12862..14232
DNA (1371bp) protein (457aa)
ParB domain protein nuclease (Fragment) id=4854923 bin=GWC2_TM7_48_9 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good rbh
ParB domain protein nuclease {ECO:0000313|EMBL:KKW04891.1}; TaxID=1619071 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9.;"
DNA modification methylase
SCNpilot_cont_750_bf_scaffold_2166_16
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

Not on your lists

14201..14812
DNA (612bp) protein (204aa)
id=4854924 bin=GWC2_TM7_48_9 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good rbh
Uncharacterized protein {ECO:0000313|EMBL:KKW04892.1}; TaxID=1619071 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9.;"
SCNpilot_cont_750_bf_scaffold_2166_17
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

Not on your lists

14864..15169
DNA (306bp) protein (102aa)
id=4854925 bin=GWC2_TM7_48_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
Uncharacterized protein {ECO:0000313|EMBL:KKW04893.1}; TaxID=1619071 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9.;"
SCNpilot_cont_750_bf_scaffold_2166_18
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(15159..15989)
DNA (831bp) protein (277aa)
Transporter id=4854926 bin=GWC2_TM7_48_9 species=Corynebacterium jeikeium genus=Corynebacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good rbh
Transporter {ECO:0000313|EMBL:KKW04894.1}; TaxID=1619071 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9.;"
hypothetical protein rbh
Displaying 18 items

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