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SCNpilot_expt_500_p_scaffold_609

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_609_1
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

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3..659
DNA (657bp) protein (219aa)
transmembrane_regions id=5226046 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
Uncharacterized protein {ECO:0000313|EMBL:AHB41981.1}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
SCNpilot_expt_500_p_scaffold_609_2
Candidatus Saccharibacteria oral taxon TM7x, Candidatus Saccharibacteria, Bacteria

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704..2587
DNA (1884bp) protein (628aa)
alaS; Alanine--tRNA ligase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PKA6_9BACT
Alanyl-tRNA synthetase {ECO:0000313|EMBL:AJA06576.1}; TaxID=1476577 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria oral taxon TM7x.;"
SCNpilot_expt_500_p_scaffold_609_3
unknown

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comp(2591..3691)
DNA (1101bp) protein (367aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_609_4
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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3775..5037
DNA (1263bp) protein (421aa)
cell division protein (septum formation) id=2443438 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
Actin-like ATPase involved in cell division-like protein
Tax=GWC2_TM7_44_17_curated
SCNpilot_expt_500_p_scaffold_609_5
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

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5040..6710
DNA (1671bp) protein (557aa)
Putative uncharacterized protein id=4339283 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good rbh
Uncharacterized protein {ECO:0000313|EMBL:KKW02610.1}; TaxID=1619071 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_609_6
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

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6703..7110
DNA (408bp) protein (136aa)
putative Holliday junction resolvase (EC:3.1.-.-)
Holliday junction resolvase n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B214F
Tax=CG_TM7_01
SCNpilot_expt_500_p_scaffold_609_7
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

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7103..8320
DNA (1218bp) protein (406aa)
Aminodeoxychorismate lyase n=1 Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RTX0_9BACT rbh
putative Aminodeoxychorismate lyase rbh
Tax=CG_TM7_01
SCNpilot_expt_500_p_scaffold_609_8
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

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8571..9833
DNA (1263bp) protein (421aa)
Putative CHAP domain containing protein n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PKA2_9BACT rbh
putative CHAP domain containing protein rbh
Tax=CG_TM7_01
SCNpilot_expt_500_p_scaffold_609_9
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

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9908..11203
DNA (1296bp) protein (432aa)
GTPase obg id=2443250 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
obg; GTPase obg
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_expt_500_p_scaffold_609_10
Candidatus Saccharibacteria oral taxon TM7x, Candidatus Saccharibacteria, Bacteria

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11917..13335
DNA (1419bp) protein (473aa)
Exodeoxyribonuclease I (EC:3.1.11.1)
Exonuclease I {ECO:0000313|EMBL:AJA06571.1}; TaxID=1476577 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria oral taxon TM7x.;"
Exodeoxyribonuclease I id=2443241 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
SCNpilot_expt_500_p_scaffold_609_11
unknown

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comp(13332..13610)
DNA (279bp) protein (93aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_609_12
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

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13774..16587
DNA (2814bp) protein (938aa)
UvrABC system protein A id=2443235 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
uvrA; excinuclease ABC (subunit A)
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_expt_500_p_scaffold_609_13
Candidatus Saccharimonas aalborgensis, Candidatus Saccharimonas, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(16584..18395)
DNA (1812bp) protein (604aa)
putative 1,4-alpha-glucan branching enzyme (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme {ECO:0000256|SAAS:SAAS00046836}; EC=2.4.1.18 {ECO:0000256|SAAS:SAAS00046836};; TaxID=1332188 species="Bacteria; Candidatus Saccharibacteria; Candidatus Saccharimonas.;" source="Candidatus Saccharimonas aalborgensis.;"
Putative 1,4-alpha-glucan branching enzyme n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PLT9_9BACT
SCNpilot_expt_500_p_scaffold_609_14
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

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comp(18405..19139)
DNA (735bp) protein (245aa)
Putative membrane protein id=2443231 bin=GWC2_TM7_44_17 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
SCNpilot_expt_500_p_scaffold_609_15
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

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19252..19992
DNA (741bp) protein (247aa)
50S ribosomal protein L25 id=2443228 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
rplY; 50S ribosomal protein L25
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
SCNpilot_expt_500_p_scaffold_609_16
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(20026..20835)
DNA (810bp) protein (270aa)
Metal dependent phosphohydrolase id=4042040 bin=GWC2_TM7_44_17 species=Frankia sp. EUN1f genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Tax=GWC2_TM7_44_17_curated
SCNpilot_expt_500_p_scaffold_609_17
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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comp(20819..21526)
DNA (708bp) protein (236aa)
NUDIX hydrolase id=4042039 bin=GWC2_TM7_44_17 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
putative NUDIX hydrolase
Tax=GWC2_TM7_44_17_curated
SCNpilot_expt_500_p_scaffold_609_18
Clostridium sp. SY8519, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21597..23393)
DNA (1797bp) protein (599aa)
ABC-type multidrug/protein/lipid transport system, ATPase component n=1 Tax=Clostridium sp. (strain SY8519) RepID=F7V857_CLOSS rbh
MdlB; multidrug/protein/lipid ABC transporter ATPase; K06147 ATP-binding cassette, subfamily B, bacterial rbh
ABC-type multidrug/protein/lipid transport system, ATPase component {ECO:0000313|EMBL:BAK46317.1}; TaxID=1042156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain SY8519).;"
SCNpilot_expt_500_p_scaffold_609_19
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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comp(23404..25212)
DNA (1809bp) protein (603aa)
ABC-type multidrug/protein/lipid transport system, ATPase component id=2443214 bin=GWC2_TM7_44_17 species=Clostridium sp. genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
ABC transporter; K06147 ATP-binding cassette, subfamily B, bacterial
Tax=GWC2_TM7_44_17_curated
SCNpilot_expt_500_p_scaffold_609_20
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

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comp(25219..25665)
DNA (447bp) protein (149aa)
coiled-coil 47..68 id=133314 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Uncharacterized protein {ECO:0000313|EMBL:KKT43633.1}; TaxID=1619017 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWE2_44_13.;"
SCNpilot_expt_500_p_scaffold_609_21
Leeuwenhoekiella blandensis, Leeuwenhoekiella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(25794..26180)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Leeuwenhoekiella blandensis (strain CECT 7118 / CCUG 51940 / MED217) RepID=A3XG41_LEEBM
Uncharacterized protein {ECO:0000313|EMBL:EAQ50910.1}; TaxID=398720 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Leeuwenhoekiella.;" source="Leeuwenhoekiella blandensis (strain CECT 7118 / CCUG 51940 / MED217); (Flavobacterium sp. (strain MED217)).;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_609_22
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

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26263..27171
DNA (909bp) protein (303aa)
id=5225976 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
UPF0176 protein RAAC3_TM7C00001G0038 {ECO:0000256|HAMAP-Rule:MF_00469}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_609_23
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

Not on your lists

27244..27801
DNA (558bp) protein (186aa)
Uncharacterized protein id=5226815 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
Uncharacterized protein {ECO:0000313|EMBL:AHB42751.1}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_609_24
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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27866..29431
DNA (1566bp) protein (522aa)
excinuclease ABC subunit C id=2442988 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
putative excinuclease ABC, C subunit domain protein
Tax=GWC2_TM7_44_17_curated
SCNpilot_expt_500_p_scaffold_609_25
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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29505..31682
DNA (2178bp) protein (726aa)
Tail Collar domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5W3_PALPW
Tail Collar domain protein {ECO:0000313|EMBL:ADQ80107.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
tail collar domain protein
SCNpilot_expt_500_p_scaffold_609_26
unknown

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31694..32647
DNA (954bp) protein (318aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_609_27
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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32685..33875
DNA (1191bp) protein (397aa)
putative Xaa-Pro aminopeptidase (EC:3.4.11.9) rbh
X-Pro aminopeptidase id=2442981 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
Tax=GWC2_TM7_44_17_curated
SCNpilot_expt_500_p_scaffold_609_28
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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33892..34278
DNA (387bp) protein (129aa)
hypothetical protein cdiviTM7_00170 id=2442976 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
hypothetical protein
Tax=GWC2_TM7_44_17_curated
SCNpilot_expt_500_p_scaffold_609_29
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

34281..34508
DNA (228bp) protein (76aa)
hypothetical protein cdiviTM7_00165 id=2442970 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
secG; Preprotein translocase, SecG subunit
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_expt_500_p_scaffold_609_30
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

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34565..36316
DNA (1752bp) protein (584aa)
Extracellular solute-binding protein id=2442963 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
putative Extracellular solute-binding protein family 5 rbh
Tax=CG_TM7_01
Displaying 30 items

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