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ACD36_12

Alias: ACD36_239521.13556.6

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD36_12_1
R_OP11_Gottesmanbacteria_43_11b, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

3..425
DNA (423bp) protein (141aa)
GTP-binding protein LepA
seg (db=Seg db_id=seg from=72 to=84)
seg (db=Seg db_id=seg from=105 to=117)
LepA_C (db=HMMPfam db_id=PF06421 from=31 to=138 evalue=3.4e-45 interpro_id=IPR013842 interpro_description=GTP-binding protein LepA, C-terminal)
ACD36_12_2
R_OP11_Gottesmanbacteria_43_11b, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(390..1088)
DNA (699bp) protein (233aa)
seg (db=Seg db_id=seg from=210 to=224)
seg (db=Seg db_id=seg from=157 to=172)
seg (db=Seg db_id=seg from=5 to=22)
transmembrane_regions (db=TMHMM db_id=tmhmm from=204 to=226)
ACD36_12_3
R_OP11_Gottesmanbacteria_43_11b, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(1311..3665)
DNA (2355bp) protein (785aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=347 to=369)
transmembrane_regions (db=TMHMM db_id=tmhmm from=376 to=398)
seg (db=Seg db_id=seg from=98 to=110)
seg (db=Seg db_id=seg from=460 to=476)
ACD36_12_4
R_OP11_Gottesmanbacteria_43_11b, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(3646..4548)
DNA (903bp) protein (301aa)
hypothetical protein
Glycosyl transferase family 2 n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I318_CLOCE (db=UNIREF evalue=1.0e-41 bit_score=173.0 identity=36.51 coverage=79.4019933554817)
seg (db=Seg db_id=seg from=255 to=271)
no description (db=Gene3D db_id=G3DSA:3.90.550.10 from=5 to=229 evalue=1.4e-59)
ACD36_12_5
R_OP11_Gottesmanbacteria_43_11b, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(4633..5262)
DNA (630bp) protein (210aa)
4633..5262 - (rbs_motif=AAT rbs_spacer=5bp)
Uncharacterized protein Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_43_11b_curated
ACD36_12_6
R_OP11_Gottesmanbacteria_43_11b, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(5449..6084)
DNA (636bp) protein (212aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=185 to=207)
DUF11 (db=HMMPfam db_id=PF01345 from=34 to=104 evalue=8.3e-08 interpro_id=IPR001434 interpro_description=Protein of unknown function DUF11 GO=Cellular Component: extrachromosomal circular DNA (GO:0005727))
Uncharacterized protein Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_43_11b_curated
ACD36_12_7
R_OP11_Gottesmanbacteria_43_11b, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(6118..6819)
DNA (702bp) protein (234aa)
sortase family protein
seg (db=Seg db_id=seg from=97 to=110)
seg (db=Seg db_id=seg from=23 to=34)
transmembrane_regions (db=TMHMM db_id=tmhmm from=22 to=44)
ACD36_12_8
R_OP11_Gottesmanbacteria_43_11b, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(6836..7201)
DNA (366bp) protein (122aa)
6836..7201 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_43_11b_curated
ACD36_12_9
R_OP11_Gottesmanbacteria_43_11b, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

7227..8513
DNA (1287bp) protein (429aa)
zinc protease
INSULINASE (db=PatternScan db_id=PS00143 from=38 to=61 evalue=0.0 interpro_id=IPR001431 interpro_description=Peptidase M16, zinc-binding site GO=Molecular Function: metalloendopeptidase activity (GO:0004222), Biological Process: proteolysis (GO:0006508))
METALLOPROTEASE (db=HMMPanther db_id=PTHR11851 from=33 to=417 evalue=1.1e-94)
no description (db=Gene3D db_id=G3DSA:3.30.830.10 from=2 to=219 evalue=6.4e-55 interpro_id=IPR011237 interpro_description=Peptidase M16, core GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: metal ion binding (GO:0046872))
ACD36_12_10
R_OP11_Gottesmanbacteria_43_11b, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(8997..9263)
DNA (267bp) protein (89aa)
hypothetical protein
DUF3680 (db=HMMPfam db_id=PF12441 from=6 to=44 evalue=7.7e-15 interpro_id=IPR022148 interpro_description=Protein of unknown function DUF3680)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_43_11b_curated
hypothetical protein alias=ACD12_34021.4487.11G0007,ACD12_34021.4487.11_7,ACD12_C00110G00007 id=4518 tax=ACD12 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria organism_group=OP11 organism_desc=
ACD36_12_11
R_OP11_Gottesmanbacteria_43_11b, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(9232..9543)
DNA (312bp) protein (104aa)
hypothetical protein
DUF497 (db=HMMPfam db_id=PF04365 from=12 to=90 evalue=8.5e-24 interpro_id=IPR007460 interpro_description=Protein of unknown function DUF497)
hypothetical protein; K09803 hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_43_11b_curated
protein of unknown function DUF497; K09803 hypothetical protein alias=ACD40_C00011G00004,ACD40_100183.9308.15G0004,ACD40_100183.9308.15_4 id=51394 tax=ACD40 species=unknown genus=unknown taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi organism_group=OP11 organism_desc=OP11
ACD36_12_12
R_OP11_Gottesmanbacteria_43_11b, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

9614..9823
DNA (210bp) protein (70aa)
9614..9823 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_43_11b_curated
ACD36_12_13
R_OP11_Gottesmanbacteria_43_11b, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(10805..11623)
DNA (819bp) protein (273aa)
seg (db=Seg db_id=seg from=91 to=110)
seg (db=Seg db_id=seg from=28 to=41)
seg (db=Seg db_id=seg from=11 to=24)
transmembrane_regions (db=TMHMM db_id=tmhmm from=244 to=266)
ACD36_12_14
R_OP11_Gottesmanbacteria_43_11b, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(11630..11929)
DNA (300bp) protein (100aa)
11630..11929 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_43_11b_curated
ACD36_12_15
R_OP11_Gottesmanbacteria_43_11b, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(11943..12623)
DNA (681bp) protein (227aa)
septum formation protein Maf
seg (db=Seg db_id=seg from=25 to=38)
seg (db=Seg db_id=seg from=155 to=167)
Maf (db=HMMPfam db_id=PF02545 from=39 to=223 evalue=5.3e-32 interpro_id=IPR003697 interpro_description=Maf-like protein GO=Cellular Component: cytoplasm (GO:0005737))
ACD36_12_16
R_OP11_Gottesmanbacteria_43_11b, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(12936..13589)
DNA (654bp) protein (218aa)
DPP6 N-terminal domain-like (db=superfamily db_id=SSF82171 from=5 to=216 evalue=8.9e-06)
Serine/threonine protein kinase S-layer protein (EC:2.7.11.1) Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_43_11b_curated
Displaying 16 items

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