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ACD36_56

Alias: ACD36_22418.2434.6

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD36_56_1

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comp(2..247)
DNA (246bp) protein (82aa)
DNA_ligase_A_N (db=HMMPfam db_id=PF04675 from=1 to=74 evalue=2.4e-12 interpro_id=IPR012308 interpro_description=DNA ligase, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA ligase (ATP) activity (GO:0003910), Biological Process: DNA replication (GO:0006260), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
ATP-dependent DNA ligase DNA-binding domain (db=superfamily db_id=SSF117018 from=2 to=80 evalue=5.0e-10)
no description (db=Gene3D db_id=G3DSA:1.10.3260.10 from=3 to=80 evalue=4.6e-05)
DNA ligase {ECO:0000313|EMBL:EKD87418.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD36_56_2

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comp(263..1255)
DNA (993bp) protein (331aa)
hypothetical protein
seg (db=Seg db_id=seg from=314 to=325)
Fic-like (db=superfamily db_id=SSF140931 from=74 to=262 evalue=2.0e-10)
FIDO (db=ProfileScan db_id=PS51459 from=98 to=238 evalue=12.216)
ACD36_56_3

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comp(1285..2349)
DNA (1065bp) protein (355aa)
DNA replication and repair protein RecF
DNA replication and repair protein recF n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVC4_9BACT (db=UNIREF evalue=3.0e-91 bit_score=338.0 identity=52.49 coverage=95.7746478873239)
seg (db=Seg db_id=seg from=94 to=109)
RECF_2 (db=PatternScan db_id=PS00618 from=304 to=322 evalue=0.0 interpro_id=IPR018078 interpro_description=DNA-binding, RecF, conserved site GO=Molecular Function: single-stranded DNA binding (GO:0003697), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA repair (GO:0006281))
ACD36_56_4

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2370..2468
DNA (99bp) protein (33aa)
2370..2468 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD87421.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 4 items

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