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ACD12_12

Alias: ACD12_511525.5496.7

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD12_12_1

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comp(3..1640)
DNA (1638bp) protein (546aa)
groEL; 60 kDa chaperonin
groEL; 60 kDa chaperonin
60 kDa chaperonin 2 n=2 Tax=Roseiflexus RepID=CH602_ROSS1 (db=UNIREF evalue=1.0e-142 bit_score=510.0 identity=54.43 coverage=97.2527472527473)
seg (db=Seg db_id=seg from=164 to=179)
ACD12_12_2

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comp(1748..2074)
DNA (327bp) protein (109aa)
groES; chaperonin Cpn10
seg (db=Seg db_id=seg from=51 to=61)
no description (db=HMMSmart db_id=SM00883 from=7 to=107 evalue=9.2e-32 interpro_id=IPR001476 interpro_description=Chaperonin Cpn10, subgroup GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: protein folding (GO:0006457))
GroES-like (db=superfamily db_id=SSF50129 from=4 to=108 evalue=9.4e-27 interpro_id=IPR011032 interpro_description=GroES-like)
ACD12_12_3

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2571..3371
DNA (801bp) protein (267aa)
hypothetical protein
seg (db=Seg db_id=seg from=156 to=165)
ATP DEPENDENT LON PROTEASE FAMILY MEMBER (db=HMMPanther db_id=PTHR10046 from=1 to=266 evalue=4.8e-69)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=3 to=266 evalue=3.1e-37)
ACD12_12_4

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comp(3368..3772)
DNA (405bp) protein (135aa)
hypothetical protein
DUF458 (db=HMMPfam db_id=PF04308 from=2 to=134 evalue=4.6e-44 interpro_id=IPR007405 interpro_description=Protein of unknown function DUF458, RNase H-like)
hypothetical protein; K09776 hypothetical protein alias=ACD12_C00012G00004,ACD12_511525.5496.7G0004,ACD12_511525.5496.7_4 id=3670 tax=ACD12 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OP11 organism_desc=
Uncharacterized protein {ECO:0000313|EMBL:EKE14215.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_12_5

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comp(3873..4742)
DNA (870bp) protein (290aa)
short-chain dehydrogenase
seg (db=Seg db_id=seg from=129 to=140)
ADH_SHORT (db=PatternScan db_id=PS00061 from=139 to=167 evalue=0.0 interpro_id=IPR020904 interpro_description=Short-chain dehydrogenase/reductase, conserved site GO=Molecular Function: oxidoreductase activity (GO:0016491))
SHORT-CHAIN DEHYDROGENASE-RELATED (db=HMMPanther db_id=PTHR19410:SF46 from=1 to=264 evalue=5.9e-64)
ACD12_12_6

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comp(4739..5473)
DNA (735bp) protein (245aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
Lip_A_acyltrans (db=HMMPfam db_id=PF03279 from=56 to=234 evalue=5.4e-14 interpro_id=IPR004960 interpro_description=Bacterial lipid A biosynthesis acyltransferase GO=Molecular Function: acyltransferase activity (GO:0008415), Biological Process: lipopolysaccharide core region biosynthetic process (GO:0009244), Cellular Component: integral to membrane (GO:0016021))
Uncharacterized protein {ECO:0000313|EMBL:EKE14213.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 6 items

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