ggKbase home page

ACD12_29

Alias: ACD12_122964.4034.4

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD12_29_1

Not on your lists

1..294
DNA (294bp) protein (98aa)
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=Q1VVH0_9FLAO (db=UNIREF evalue=1.0e-25 bit_score=119.0 identity=55.91 coverage=93.8775510204082)
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase
GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE (db=HMMPanther db_id=PTHR10836 from=2 to=96 evalue=4.4e-37 interpro_id=IPR000173 interpro_description=Glyceraldehyde 3-phosphate dehydrogenase subfamily GO=Molecular Function: glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity (GO:0004365), Biological Process: glucose metabolic process (GO:0006006), Molecular Function: NAD or NADH binding (GO:0051287), Biological Process: oxidation reduction (GO:0055114))
GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE (db=HMMPanther db_id=PTHR10836:SF4 from=2 to=96 evalue=4.4e-37)
ACD12_29_2

Not on your lists

comp(285..1988)
DNA (1704bp) protein (568aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=107 to=126)
seg (db=Seg db_id=seg from=107 to=125)
Uncharacterized protein {ECO:0000313|EMBL:EKE15326.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_29_3

Not on your lists

2654..2983
DNA (330bp) protein (110aa)
Transaldolase n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L855_9DELT (db=UNIREF evalue=2.0e-30 bit_score=134.0 identity=56.36 coverage=97.2727272727273)
transaldolase family protein
Aldolase (db=superfamily db_id=SSF51569 from=1 to=109 evalue=2.4e-15)
Transaldolase (db=HMMPfam db_id=PF00923 from=2 to=108 evalue=1.1e-11 interpro_id=IPR001585 interpro_description=Transaldolase GO=Biological Process: carbohydrate metabolic process (GO:0005975))
ACD12_29_4

Not on your lists

2992..3669
DNA (678bp) protein (226aa)
LexA repressor (EC:3.4.21.88)
lexA: repressor LexA (db=HMMTigr db_id=TIGR00498 from=15 to=221 evalue=2.2e-38 interpro_id=IPR006200 interpro_description=Peptidase S24, LexA repressor GO=Molecular Function: serine-type endopeptidase activity (GO:0004252), Biological Process: proteolysis (GO:0006508))
no description (db=Gene3D db_id=G3DSA:2.10.109.10 from=100 to=222 evalue=6.6e-25 interpro_id=IPR011056 interpro_description=Peptidase S24/S26A/S26B/S26C, beta-ribbon domain)
LexA/Signal peptidase (db=superfamily db_id=SSF51306 from=93 to=218 evalue=1.5e-24 interpro_id=IPR015927 interpro_description=Peptidase S24/S26A/S26B/S26C)
ACD12_29_5

Not on your lists

3672..4067
DNA (396bp) protein (132aa)
type I restriction/modification system N-6 DNA methyltransferase
type I restriction/modification system N-6 DNA methyltransferase alias=ACD12_C00029G00005,ACD12_122964.4034.4G0005,ACD12_122964.4034.4_5 id=3819 tax=ACD12 species=Geobacter bemidjiensis genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=OP11 organism_desc=
Type I restriction/modification system N-6 DNA methyltransferase {ECO:0000313|EMBL:EKE15324.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;
Displaying 5 items

View Taxonomy