Alias: ACD12_91444.6001.13
name | lists | location/seqs | annotations | notes |
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ACD12_40_1
uncultured bacterium, Bacteria
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Not on your lists |
comp(31..510)
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seg (db=Seg db_id=seg from=79 to=91)
PIN domain-like (db=superfamily db_id=SSF88723 from=19 to=152 evalue=3.4e-10)
PIN (db=HMMPfam db_id=PF01850 from=20 to=138 evalue=7.9e-07 interpro_id=IPR002716 interpro_description=PilT protein, N-terminal)
Uncharacterized protein {ECO:0000313|EMBL:EKE13732.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD12_40_2
uncultured bacterium, Bacteria
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Not on your lists |
comp(467..631)
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467..631 - (rbs_motif=TAA rbs_spacer=11bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE13733.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD12_40_3
uncultured bacterium, Bacteria
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Not on your lists |
723..998
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methionyl-tRNA synthetase subunit beta
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=4 to=80 evalue=4.6e-18 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=10 to=80 evalue=4.6e-17 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold)
tRNA_bind (db=HMMPfam db_id=PF01588 from=16 to=81 evalue=6.4e-14 interpro_id=IPR002547 interpro_description=tRNA-binding domain GO=Molecular Function: tRNA binding (GO:0000049))
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ACD12_40_4
uncultured bacterium, Bacteria
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Not on your lists |
1048..1875
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nhaA3; DSBA-like thioredoxin domain-containing protein
Putative uncharacterized protein n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q09B44_STIAU (db=UNIREF evalue=9.0e-35 bit_score=150.0 identity=39.29 coverage=69.9275362318841)
transmembrane_regions (db=TMHMM db_id=tmhmm from=24 to=41)
seg (db=Seg db_id=seg from=53 to=64)
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ACD12_40_5
uncultured bacterium, Bacteria
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Not on your lists |
2092..2550
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greA; transcription elongation factor GreA
seg (db=Seg db_id=seg from=64 to=82)
greA: transcription elongation factor GreA (db=HMMTigr db_id=TIGR01462 from=5 to=152 evalue=5.0e-55 interpro_id=IPR006359 interpro_description=Transcription elongation factor GreA GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
GreA transcript cleavage protein, N-terminal domain (db=superfamily db_id=SSF46557 from=2 to=79 evalue=4.4e-23 interpro_id=IPR022691 interpro_description=Transcription elongation factor, GreA/GreB, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
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ACD12_40_6
uncultured bacterium, Bacteria
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Not on your lists |
comp(2552..3205)
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hypothetical protein
Putative uncharacterized protein n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J3I6_9FLAO (db=UNIREF evalue=2.0e-47 bit_score=192.0 identity=45.87 coverage=98.6238532110092)
Uncharacterized protein {ECO:0000313|EMBL:EKE13737.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD12_40_7
uncultured bacterium, Bacteria
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Not on your lists |
3312..4319
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seg (db=Seg db_id=seg from=249 to=261)
Uncharacterized protein {ECO:0000313|EMBL:EKE13738.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD12_40_8
uncultured bacterium, Bacteria
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Not on your lists |
4322..5317
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histone deacetylase superfamily protein
Arginase/deacetylase (db=superfamily db_id=SSF52768 from=1 to=331 evalue=4.6e-78)
no description (db=Gene3D db_id=G3DSA:3.40.800.20 from=6 to=331 evalue=4.8e-72 interpro_id=IPR000286 interpro_description=Histone deacetylase superfamily)
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ACD12_40_9
uncultured bacterium, Bacteria
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Not on your lists |
5759..6037
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lysine--tRNA ligase (EC:6.1.1.6)
tRNA-synt_1f (db=HMMPfam db_id=PF01921 from=2 to=93 evalue=4.1e-19 interpro_id=IPR020754 interpro_description=Lysyl-tRNA synthetase, class Ic GO=Molecular Function: lysine-tRNA ligase activity (GO:0004824), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: lysyl-tRNA aminoacylation (GO:0006430))
lysine--tRNA ligase (EC:6.1.1.6); K04566 lysyl-tRNA synthetase, class I [EC:6.1.1.6] alias=ACD12_91444.6001.13G0009,ACD12_91444.6001.13_9,ACD12_C00040G00009 id=3912 tax=ACD12 species=Nitrosococcus oceani genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria organism_group=OP11 organism_desc=
Uncharacterized protein {ECO:0000313|EMBL:EKE13731.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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