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ACD12_56

Alias: ACD12_20914.3445.13

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD12_56_1

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comp(3..143)
DNA (141bp) protein (47aa)
coiled-coil (db=Coil db_id=coil from=8 to=32 evalue=NA)
seg (db=Seg db_id=seg from=11 to=27)
seg (db=Seg db_id=seg from=28 to=40)
Uncharacterized protein {ECO:0000313|EMBL:EKE15019.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_56_2

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comp(155..373)
DNA (219bp) protein (73aa)
155..373 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE15020.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_56_3
GWC2_OP11_ACD12-rel_34_23, Roizmanbacteria, Microgenomates, Bacteria

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comp(390..1298)
DNA (909bp) protein (303aa)
DNA polymerase III gamma and tau subunit
seg (db=Seg db_id=seg from=252 to=267)
dnaX_nterm: DNA polymerase III, subunit ga (db=HMMTigr db_id=TIGR02397 from=2 to=302 evalue=7.7e-61 interpro_id=IPR012763 interpro_description=DNA polymerase III, subunit gamma/ tau GO=Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA replication (GO:0006260), Cellular Component: DNA polymerase III complex (GO:0009360))
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=29 to=246 evalue=5.9e-52)
ACD12_56_4

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comp(1371..1721)
DNA (351bp) protein (117aa)
UPF0054 (db=HMMPfam db_id=PF02130 from=16 to=114 evalue=3.8e-13 interpro_id=IPR002036 interpro_description=Uncharacterised protein family UPF0054 GO=Molecular Function: metallopeptidase activity (GO:0008237), Molecular Function: zinc ion binding (GO:0008270))
Metalloproteases ("zincins"), catalytic domain (db=superfamily db_id=SSF55486 from=1 to=111 evalue=5.6e-11)
no description (db=Gene3D db_id=G3DSA:3.40.390.30 from=3 to=115 evalue=5.4e-06)
Uncharacterized protein {ECO:0000313|EMBL:EKE15015.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_56_5

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comp(1718..1936)
DNA (219bp) protein (73aa)
seg (db=Seg db_id=seg from=59 to=72)
seg (db=Seg db_id=seg from=44 to=54)
Ribosomal_S21 (db=HMMPfam db_id=PF01165 from=4 to=56 evalue=1.2e-08 interpro_id=IPR001911 interpro_description=Ribosomal protein S21 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
S21p: ribosomal protein S21 (db=HMMTigr db_id=TIGR00030 from=2 to=60 evalue=0.00011 interpro_id=IPR001911 interpro_description=Ribosomal protein S21 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD12_56_6

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comp(2069..2905)
DNA (837bp) protein (279aa)
hypothetical protein
seg (db=Seg db_id=seg from=143 to=156)
DHH phosphoesterases (db=superfamily db_id=SSF64182 from=1 to=82 evalue=1.2e-06)
hypothetical protein alias=ACD12_C00056G00006,ACD12_20914.3445.13_6,ACD12_20914.3445.13G0006 id=4048 tax=ACD12 species=Roseiflexus sp. RS-1 genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi organism_group=OP11 organism_desc=
ACD12_56_7

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comp(3019..3483)
DNA (465bp) protein (155aa)
Prolyl-tRNA synthetase
seg (db=Seg db_id=seg from=78 to=89)
PROLYL-TRNA SYNTHETASE (db=HMMPanther db_id=PTHR11451:SF3 from=2 to=153 evalue=1.5e-45)
TRNA SYNTHETASE-RELATED (db=HMMPanther db_id=PTHR11451 from=2 to=153 evalue=1.5e-45)
Displaying 7 items

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