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ACD12_80

Alias: ACD12_73983.12024.13

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD12_80_1

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comp(172..1011)
DNA (840bp) protein (280aa)
istA1; protein IstA1
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=120 to=277 evalue=6.3e-38 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
rve (db=HMMPfam db_id=PF00665 from=123 to=232 evalue=1.3e-17 interpro_id=IPR001584 interpro_description=Integrase, catalytic core GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA integration (GO:0015074))
no description (db=Gene3D db_id=G3DSA:3.30.420.10 from=123 to=277 evalue=2.1e-07)
ACD12_80_2
CG_Pacebac_01, Pacebacteria, Microgenomates, Bacteria

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comp(1022..1297)
DNA (276bp) protein (92aa)
putative transposase
putative transposase alias=ACD12_C00080G00002,ACD12_73983.12024.13G0002,ACD12_73983.12024.13_2 id=4241 tax=ACD12 species=Cyanothece sp. ATCC 51142 genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria organism_group=OP11 organism_desc=
transposase IS3/IS911 family protein Tax=CG_Pacebac_01
ACD12_80_3

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comp(1468..2301)
DNA (834bp) protein (278aa)
seg (db=Seg db_id=seg from=96 to=102)
seg (db=Seg db_id=seg from=250 to=261)
Uncharacterized protein {ECO:0000313|EMBL:EKE13894.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_80_4

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2354..2824
DNA (471bp) protein (157aa)
hypothetical protein
DUF458 (db=HMMPfam db_id=PF04308 from=17 to=156 evalue=5.1e-46 interpro_id=IPR007405 interpro_description=Protein of unknown function DUF458, RNase H-like)
hypothetical protein; K09776 hypothetical protein alias=ACD12_C00080G00004,ACD12_73983.12024.13_4,ACD12_73983.12024.13G0004 id=4237 tax=ACD12 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OP11 organism_desc=
Uncharacterized protein {ECO:0000313|EMBL:EKE13895.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_80_5

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comp(2821..3864)
DNA (1044bp) protein (348aa)
hypothetical protein
ATP DEPENDENT LON PROTEASE FAMILY MEMBER (db=HMMPanther db_id=PTHR10046 from=1 to=347 evalue=1.7e-85)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=64 to=332 evalue=1.6e-41)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=70 to=256 evalue=3.3e-22)
ACD12_80_6

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4000..4326
DNA (327bp) protein (109aa)
groES; chaperonin Cpn10
seg (db=Seg db_id=seg from=51 to=67)
no description (db=HMMSmart db_id=SM00883 from=7 to=107 evalue=7.0e-34 interpro_id=IPR001476 interpro_description=Chaperonin Cpn10, subgroup GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: protein folding (GO:0006457))
GroES-like (db=superfamily db_id=SSF50129 from=4 to=108 evalue=4.2e-27 interpro_id=IPR011032 interpro_description=GroES-like)
ACD12_80_7

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4374..6044
DNA (1671bp) protein (557aa)
60 kDa chaperonin
60 kDa chaperonin
60 kDa chaperonin n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJS5_9FIRM (db=UNIREF evalue=1.0e-144 bit_score=516.0 identity=56.24 coverage=93.8958707360862)
seg (db=Seg db_id=seg from=247 to=258)
ACD12_80_8

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comp(6038..7264)
DNA (1227bp) protein (409aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase
UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase n=3 Tax=Roseburia intestinalis RepID=C7G768_9FIRM (db=UNIREF evalue=7.0e-61 bit_score=238.0 identity=36.59 coverage=94.1320293398533)
seg (db=Seg db_id=seg from=90 to=102)
FOLYLPOLYGLU_SYNT_1 (db=PatternScan db_id=PS01011 from=89 to=113 evalue=0.0 interpro_id=IPR018109 interpro_description=Folylpolyglutamate synthetase, conserved site GO=Molecular Function: tetrahydrofolylpolyglutamate synthase activity (GO:0004326), Molecular Function: ATP binding (GO:0005524), Biological Process: folic acid and derivative biosynthetic process (GO:0009396))
ACD12_80_9

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comp(7261..8466)
DNA (1206bp) protein (402aa)
hypothetical protein
hypothetical protein alias=ACD12_C00080G00009,ACD12_73983.12024.13G0009,ACD12_73983.12024.13_9 id=4242 tax=ACD12 species=Xanthomonas albilineans genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria organism_group=OP11 organism_desc=
Uncharacterized protein {ECO:0000313|EMBL:EKE13900.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_80_10

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comp(8486..9604)
DNA (1119bp) protein (373aa)
hypothetical protein
seg (db=Seg db_id=seg from=151 to=165)
GTP_HflX: GTP-binding protein HflX (db=HMMTigr db_id=TIGR03156 from=6 to=371 evalue=2.4e-112 interpro_id=IPR016496 interpro_description=GTP-binding protein, HflX)
Predicted GTP-binding protein, HflX type (db=HMMPIR db_id=PIRSF006809 from=5 to=372 evalue=1.0e-88 interpro_id=IPR016496 interpro_description=GTP-binding protein, HflX)
ACD12_80_11
OP11_GWA2_32_13, Roizmanbacteria, Microgenomates, Bacteria

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comp(9859..10065)
DNA (207bp) protein (69aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=37 to=56)
Uncharacterized protein {ECO:0000313|EMBL:KKP33066.1}; TaxID=1618475 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWA2_32_13.;"
ACD12_80_12

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10393..10965
DNA (573bp) protein (191aa)
seg (db=Seg db_id=seg from=68 to=74)
seg (db=Seg db_id=seg from=82 to=93)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
transmembrane_regions (db=TMHMM db_id=tmhmm from=50 to=72)
Displaying 12 items

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