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ACD12_86

Alias: ACD12_27118.43669.14

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Displaying items 31-41 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD12_86_31

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29737..30189
DNA (453bp) protein (151aa)
dTDP-4-dehydrorhamnose 35-epimerase-like protein (EC:5.1.3.13)
Polysaccharide biosynthesis domain protein n=1 Tax=Candidatus Pelagibacter sp. HTCC7211 RepID=B6BQZ0_9RICK (db=UNIREF evalue=4.0e-45 bit_score=183.0 identity=56.38 coverage=97.3509933774834)
DTDP-6-DEOXY-D-GLUCOSE-3,5 EPIMERASE (db=HMMPanther db_id=PTHR21047 from=1 to=148 evalue=5.9e-37 interpro_id=IPR000888 interpro_description=dTDP-4-dehydrorhamnose 3,5-epimerase related GO=Molecular Function: dTDP-4-dehydrorhamnose 3,5-epimerase activity (GO:0008830), Biological Process: lipopolysaccharide biosynthetic process (GO:0009103))
RmlC-like cupins (db=superfamily db_id=SSF51182 from=1 to=146 evalue=6.8e-31 interpro_id=IPR011051 interpro_description=Cupin, RmlC-type)
ACD12_86_32

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comp(30182..31741)
DNA (1560bp) protein (520aa)
group 1 glycosyl transferase
seg (db=Seg db_id=seg from=483 to=494)
seg (db=Seg db_id=seg from=409 to=441)
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=1 to=239 evalue=2.2e-21)
ACD12_86_33

Not on your lists

31785..32831
DNA (1047bp) protein (349aa)
acetyltransferase (isoleucine patch superfamily)-like protein
HEXAPEP_TRANSFERASES (db=PatternScan db_id=PS00101 from=122 to=150 evalue=0.0 interpro_id=IPR018357 interpro_description=Hexapeptide transferase, conserved site GO=Molecular Function: transferase activity (GO:0016740))
no description (db=Gene3D db_id=G3DSA:2.160.10.10 from=12 to=215 evalue=2.2e-41)
Trimeric LpxA-like enzymes (db=superfamily db_id=SSF51161 from=53 to=213 evalue=2.9e-33 interpro_id=IPR011004 interpro_description=Trimeric LpxA-like GO=Molecular Function: transferase activity (GO:0016740))
ACD12_86_34

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32858..35110
DNA (2253bp) protein (751aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=408 to=427)
transmembrane_regions (db=TMHMM db_id=tmhmm from=434 to=451)
seg (db=Seg db_id=seg from=14 to=24)
ACD12_86_35

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35112..36914
DNA (1803bp) protein (601aa)
seg (db=Seg db_id=seg from=416 to=431)
seg (db=Seg db_id=seg from=282 to=294)
seg (db=Seg db_id=seg from=79 to=108)
seg (db=Seg db_id=seg from=69 to=76)
ACD12_86_36

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36911..39157
DNA (2247bp) protein (749aa)
hypothetical protein (db=KEGG evalue=8.0e-18 bit_score=96.3 identity=25.04 coverage=82.7770360480641)
seg (db=Seg db_id=seg from=431 to=441)
seg (db=Seg db_id=seg from=333 to=342)
seg (db=Seg db_id=seg from=198 to=213)
ACD12_86_37
GWC1_OP11_37_12, Roizmanbacteria, Microgenomates, Bacteria

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39160..40548
DNA (1389bp) protein (463aa)
seg (db=Seg db_id=seg from=417 to=437)
seg (db=Seg db_id=seg from=284 to=296)
seg (db=Seg db_id=seg from=247 to=261)
seg (db=Seg db_id=seg from=42 to=58)
ACD12_86_38

Not on your lists

40745..41548
DNA (804bp) protein (268aa)
40745..41548 + (rbs_motif=ATA rbs_spacer=3bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE14740.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_86_39

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comp(41540..42868)
DNA (1329bp) protein (443aa)
glycosyltransferase
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=10 to=441 evalue=2.8e-47)
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526 from=2 to=441 evalue=1.3e-44)
MANNOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526:SF29 from=2 to=441 evalue=1.3e-44)
ACD12_86_40

Not on your lists

42914..43621
DNA (708bp) protein (236aa)
glycosyltransferase and TPR domain-containing protein
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=1 to=223 evalue=1.1e-32)
no description (db=Gene3D db_id=G3DSA:3.90.550.10 from=4 to=192 evalue=2.2e-13)
Glycos_transf_2 (db=HMMPfam db_id=PF00535 from=40 to=126 evalue=2.7e-08 interpro_id=IPR001173 interpro_description=Glycosyl transferase, family 2)
ACD12_86_41
ACD12, ACD12, ACD12, ACD12, Microgenomates, Bacteria

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43643..43705
DNA (63bp) protein (21aa)
43643..43705 + (rbs_motif=TAA rbs_spacer=3bp)
Displaying items 31-41 of 41 in total

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