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ACD12_101

Alias: ACD12_65252.7761.14

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD12_101_1
GWA2_OP11_ACD12_33_33, Roizmanbacteria, Microgenomates, Bacteria

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comp(132..836)
DNA (705bp) protein (235aa)
30S ribosomal protein S2
Ribosomal protein S2 (db=superfamily db_id=SSF52313 from=8 to=221 evalue=4.6e-63 interpro_id=IPR001865 interpro_description=Ribosomal protein S2 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_S2 (db=HMMPfam db_id=PF00318 from=11 to=221 evalue=1.3e-61 interpro_id=IPR001865 interpro_description=Ribosomal protein S2 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
30S RIBOSOMAL PROTEIN S2 (PROKARYOTIC AND ORGANELLAR) (db=HMMPanther db_id=PTHR12534 from=3 to=222 evalue=3.4e-54 interpro_id=IPR005706 interpro_description=Ribosomal protein S2, bacteria/mitochondria/plastid GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
ACD12_101_2

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comp(874..1752)
DNA (879bp) protein (293aa)
UTP--glucose-1-phosphate uridylyltransferase
UTP:glucose-1-phosphate uridylyltransferase n=1 Tax=Streptomyces clavuligerus ATCC 27064 RepID=B5GPZ1_STRCL (db=UNIREF evalue=9.0e-72 bit_score=273.0 identity=45.7 coverage=97.6109215017065)
SUGAR-1-PHOSPHATE GUANYL TRANSFERASE (db=HMMPanther db_id=PTHR22572 from=13 to=289 evalue=9.9e-94)
GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE (db=HMMPanther db_id=PTHR22572:SF14 from=13 to=289 evalue=9.9e-94)
ACD12_101_3

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comp(1749..2165)
DNA (417bp) protein (139aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=10 to=19)
Big_1 (db=HMMPfam db_id=PF02369 from=43 to=135 evalue=5.4e-06 interpro_id=IPR003344 interpro_description=Bacterial Ig-like, group 1)
Invasin/intimin cell-adhesion fragments (db=superfamily db_id=SSF49373 from=37 to=135 evalue=5.5e-06 interpro_id=IPR008964 interpro_description=Invasin/intimin cell-adhesion)
ACD12_101_4

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comp(2199..2870)
DNA (672bp) protein (224aa)
Thymidylate kinase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PY20_9BACT (db=UNIREF evalue=4.0e-43 bit_score=177.0 identity=42.59 coverage=91.0714285714286)
thymidylate kinase
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=214 evalue=5.9e-38)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=6 to=209 evalue=8.6e-36)
ACD12_101_5

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comp(2874..3074)
DNA (201bp) protein (67aa)
seg (db=Seg db_id=seg from=47 to=59)
ClpB_D2-small (db=HMMPfam db_id=PF10431 from=9 to=65 evalue=2.8e-15 interpro_id=IPR019489 interpro_description=Clp ATPase, C-terminal)
no description (db=Gene3D db_id=G3DSA:1.10.8.60 from=10 to=66 evalue=9.7e-10)
Uncharacterized protein {ECO:0000313|EMBL:EKE14016.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_101_6
GWA2_OP11_34_18_partial, Roizmanbacteria, Microgenomates, Bacteria

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comp(3154..5118)
DNA (1965bp) protein (655aa)
ATPases with chaperone activity, ATP-binding subunit n=2 Tax=Faecalibacterium prausnitzii RepID=D4KC13_9FIRM (db=UNIREF evalue=4.0e-64 bit_score=249.0 identity=28.85 coverage=69.618320610687)
ATPase AAA-2 domain-containing protein
seg (db=Seg db_id=seg from=137 to=147)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
ACD12_101_7

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5381..5824
DNA (444bp) protein (148aa)
TrpR-like (db=superfamily db_id=SSF48295 from=9 to=104 evalue=3.5e-07 interpro_id=IPR010921 interpro_description=Trp repressor/replication initiator GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
Trp_repressor (db=HMMPfam db_id=PF01371 from=18 to=82 evalue=3.6e-06 interpro_id=IPR000831 interpro_description=Trp repressor GO=Molecular Function: transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
Uncharacterized protein {ECO:0000313|EMBL:EKE14011.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Tryptophan repressor Jill Banfield (11/15/12)
ACD12_101_8

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comp(5912..6187)
DNA (276bp) protein (92aa)
5912..6187 - (rbs_motif=TAA rbs_spacer=10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE14012.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_101_9

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6405..7799
DNA (1395bp) protein (465aa)
Putative uncharacterized protein n=1 Tax=Bacillus thuringiensis serovar huazhongensis BGSC 4BD1 RepID=C3GXB9_BACTU (db=UNIREF evalue=4.0e-11 bit_score=73.2 identity=22.97 coverage=84.5161290322581)
seg (db=Seg db_id=seg from=2 to=17)
Glutathione synthetase ATP-binding domain-like (db=superfamily db_id=SSF56059 from=163 to=397 evalue=3.4e-09)
ATP_GRASP (db=ProfileScan db_id=PS50975 from=182 to=396 evalue=8.731 interpro_id=IPR011761 interpro_description=ATP-grasp fold GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: ATP binding (GO:0005524))
Displaying 9 items

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