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ACD12_125

Alias: ACD12_168889.3852.6

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD12_125_1

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1..276
DNA (276bp) protein (92aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=30 to=52)
seg (db=Seg db_id=seg from=33 to=47)
Uncharacterized protein {ECO:0000313|EMBL:EKE15127.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_125_2

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comp(387..638)
DNA (252bp) protein (84aa)
YcfA (db=HMMPfam db_id=PF07927 from=7 to=36 evalue=5.9e-05 interpro_id=IPR012933 interpro_description=YcfA-like)
Uncharacterized protein {ECO:0000313|EMBL:EKE15128.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_125_3

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comp(641..937)
DNA (297bp) protein (99aa)
641..937 - (rbs_motif=TATA rbs_spacer=8bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE15129.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_125_4

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comp(1101..2057)
DNA (957bp) protein (319aa)
Protein kinase-like (PK-like) (db=superfamily db_id=SSF56112 from=6 to=281 evalue=1.7e-16 interpro_id=IPR011009 interpro_description=Protein kinase-like domain)
APH (db=HMMPfam db_id=PF01636 from=28 to=262 evalue=1.3e-12 interpro_id=IPR002575 interpro_description=Aminoglycoside phosphotransferase)
Uncharacterized protein {ECO:0000313|EMBL:EKE15130.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_125_5

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comp(2166..3104)
DNA (939bp) protein (313aa)
putative metal-dependent protease of the PAD1/JAB1 superfamily
Mov34/MPN/PAD-1 family protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R364_PIRSD (db=UNIREF evalue=6.0e-12 bit_score=75.1 identity=33.59 coverage=40.2555910543131)
JAB1/MPN domain (db=superfamily db_id=SSF102712 from=89 to=230 evalue=3.5e-10)
Mov34 (db=HMMPfam db_id=PF01398 from=94 to=196 evalue=1.9e-05 interpro_id=IPR000555 interpro_description=Mov34/MPN/PAD-1)
ACD12_125_6

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comp(3156..3665)
DNA (510bp) protein (170aa)
tRNA splicing protein, cyclic phosphodiesterase (EC:3.1.4.-)
LigT-like (db=superfamily db_id=SSF55144 from=1 to=166 evalue=1.6e-22 interpro_id=IPR009097 interpro_description=RNA ligase/cyclic nucleotide phosphodiesterase GO=Molecular Function: catalytic activity (GO:0003824), Cellular Component: intracellular (GO:0005622), Biological Process: RNA metabolic process (GO:0016070))
CPDase (db=HMMPfam db_id=PF07823 from=1 to=133 evalue=3.3e-22 interpro_id=IPR012386 interpro_description=2',3'-cyclic-nucleotide 3'-phosphodiesterase GO=Molecular Function: cyclic-nucleotide phosphodiesterase activity (GO:0004112))
no description (db=Gene3D db_id=G3DSA:3.90.1140.10 from=3 to=127 evalue=3.9e-19)
ACD12_125_7

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3733..3885
DNA (153bp) protein (51aa)
lepA; hypothetical protein
TRANSLATION FACTOR (db=HMMPanther db_id=PTHR23115 from=1 to=51 evalue=9.2e-21)
GTP-BINDING PROTEIN LEPA (db=HMMPanther db_id=PTHR23115:SF40 from=1 to=51 evalue=9.2e-21)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=51 evalue=1.0e-12)
Displaying 7 items

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