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ACD12_142

Alias: ACD12_66559.13109.14

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD12_142_1

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comp(33..1388)
DNA (1356bp) protein (452aa)
Extracellular solute-binding protein family 5
Extracellular solute-binding protein, family 5 n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K1E4_DESAC (db=UNIREF evalue=5.0e-25 bit_score=119.0 identity=25.56 coverage=82.7433628318584)
seg (db=Seg db_id=seg from=255 to=266)
transmembrane_regions (db=TMHMM db_id=tmhmm from=23 to=45)
ACD12_142_2

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comp(1385..1603)
DNA (219bp) protein (73aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=49 to=71)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=24 to=37)
seg (db=Seg db_id=seg from=53 to=71)
ACD12_142_3

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comp(1600..1998)
DNA (399bp) protein (133aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=56 to=78)
transmembrane_regions (db=TMHMM db_id=tmhmm from=32 to=49)
seg (db=Seg db_id=seg from=111 to=128)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
ACD12_142_4

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comp(2011..2508)
DNA (498bp) protein (166aa)
Excinuclease ABC subunit C
UvrC_HhH_N (db=HMMPfam db_id=PF08459 from=13 to=151 evalue=2.3e-39 interpro_id=IPR001162 interpro_description=Excinuclease ABC, C subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: nuclease activity (GO:0004518), Biological Process: nucleotide-excision repair (GO:0006289))
UVRC_2 (db=ProfileScan db_id=PS50165 from=11 to=99 evalue=19.41 interpro_id=IPR001162 interpro_description=Excinuclease ABC, C subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: nuclease activity (GO:0004518), Biological Process: nucleotide-excision repair (GO:0006289))
uvrC; excinuclease ABC subunit C; K03703 excinuclease ABC subunit C alias=ACD12_66559.13109.14G0004,ACD12_66559.13109.14_4,ACD12_C00142G00004 id=4739 tax=ACD12 species=Megasphaera genomosp. type_1 genus=Megasphaera taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes organism_group=OP11 organism_desc=
ACD12_142_5

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comp(3307..5094)
DNA (1788bp) protein (596aa)
seg (db=Seg db_id=seg from=458 to=468)
transmembrane_regions (db=TMHMM db_id=tmhmm from=562 to=584)
seg (db=Seg db_id=seg from=23 to=34)
seg (db=Seg db_id=seg from=314 to=328)
ACD12_142_6

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comp(5258..8224)
DNA (2967bp) protein (989aa)
hypothetical protein
hypothetical protein
Excinuclease ABC, A subunit n=1 Tax=Clostridium cellulovorans 743B RepID=C5RFB9_CLOCL (db=UNIREF evalue=0.0 bit_score=917.0 identity=53.09 coverage=94.74216380182)
seg (db=Seg db_id=seg from=953 to=962)
ACD12_142_7

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comp(8229..10238)
DNA (2010bp) protein (670aa)
hypothetical protein
hypothetical protein
UvrABC system protein B n=9 Tax=Thermoanaerobacter RepID=UVRB_THETN (db=UNIREF evalue=0.0 bit_score=678.0 identity=52.66 coverage=96.7164179104478)
coiled-coil (db=Coil db_id=coil from=257 to=285 evalue=NA)
ACD12_142_8

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comp(10314..12272)
DNA (1959bp) protein (653aa)
seg (db=Seg db_id=seg from=89 to=105)
PLP-dependent transferases (db=superfamily db_id=SSF53383 from=144 to=595 evalue=1.2e-16 interpro_id=IPR015424 interpro_description=Pyridoxal phosphate-dependent transferase, major domain)
SUBGROUP I AMINOTRANSFERASE RELATED (db=HMMPanther db_id=PTHR11751 from=205 to=608 evalue=5.5e-06)
no description (db=Gene3D db_id=G3DSA:3.40.640.10 from=220 to=460 evalue=6.8e-06 interpro_id=IPR015421 interpro_description=Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: pyridoxal phosphate binding (GO:0030170))
Displaying 8 items

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