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ACD12_154

Alias: ACD12_464490.2407.6

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD12_154_1
GWA2_OP11_44_17_partial, Gottesmanbacteria, Microgenomates, Bacteria

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comp(2..247)
DNA (246bp) protein (82aa)
hypothetical protein
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=4 to=82 evalue=4.6e-33 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
SSB (db=HMMPfam db_id=PF00436 from=6 to=82 evalue=7.0e-29 interpro_id=IPR000424 interpro_description=Primosome PriB/single-strand DNA-binding GO=Molecular Function: single-stranded DNA binding (GO:0003697))
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=2 to=82 evalue=1.3e-27 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold)
ACD12_154_2

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comp(247..588)
DNA (342bp) protein (114aa)
seg (db=Seg db_id=seg from=3 to=13)
seg (db=Seg db_id=seg from=27 to=38)
RIBOSOMAL_S6 (db=PatternScan db_id=PS01048 from=64 to=73 evalue=0.0 interpro_id=IPR020815 interpro_description=Ribosomal protein S6, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
Ribosomal_S6 (db=HMMPfam db_id=PF01250 from=22 to=113 evalue=7.2e-21 interpro_id=IPR000529 interpro_description=Ribosomal protein S6 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
ACD12_154_3

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comp(716..1318)
DNA (603bp) protein (201aa)
seg (db=Seg db_id=seg from=4 to=17)
seg (db=Seg db_id=seg from=65 to=80)
Uncharacterized protein {ECO:0000313|EMBL:EKE14312.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_154_4
GWA2_OP11_44_17_partial, Gottesmanbacteria, Microgenomates, Bacteria

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comp(1457..1666)
DNA (210bp) protein (70aa)
seg (db=Seg db_id=seg from=2 to=30)
coiled-coil (db=Coil db_id=coil from=3 to=32 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:KKT45696.1}; TaxID=1618444 species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWA2_44_17.;"
ACD12_154_5
GWA2_OP11_44_17_partial, Gottesmanbacteria, Microgenomates, Bacteria

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comp(1762..1980)
DNA (219bp) protein (73aa)
1762..1980 - (rbs_motif=TAA rbs_spacer=5bp)
Uncharacterized protein {ECO:0000313|EMBL:KKT45696.1}; TaxID=1618444 species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWA2_44_17.;"
ACD12_154_6

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1999..2223
DNA (225bp) protein (75aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=45 to=67)
Uncharacterized protein {ECO:0000313|EMBL:EKE14307.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_154_7
GWA2_OP11_44_17_partial, Gottesmanbacteria, Microgenomates, Bacteria

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2220..2357
DNA (138bp) protein (46aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
seg (db=Seg db_id=seg from=19 to=29)
Uncharacterized protein {ECO:0000313|EMBL:KKT45695.1}; TaxID=1618444 species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWA2_44_17.;"
Displaying 7 items

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