ggKbase home page

ACD12_160

Alias: ACD12_320411.4199.4

Search features with annotation key words

Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD12_160_1
RIFOXYB2_FULL_OD1_Magasanikbacteria_38_10_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

3..1772
DNA (1770bp) protein (590aa)
translation elongation factor g
seg (db=Seg db_id=seg from=121 to=133)
EF-G: translation elongation factor G (db=HMMTigr db_id=TIGR00484 from=1 to=589 evalue=6.2e-291 interpro_id=IPR004540 interpro_description=Translation elongation factor EFG/EF2 GO=Molecular Function: translation elongation factor activity (GO:0003746), Molecular Function: GTP binding (GO:0005525), Cellular Component: intracellular (GO:0005622), Biological Process: translational elongation (GO:0006414))
TRANSLATION ELONGATION FACTOR G (db=HMMPanther db_id=PTHR23115:SF13 from=1 to=320 evalue=1.5e-96)
ACD12_160_2
GWA2_OD1_42_32, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

1870..2289
DNA (420bp) protein (140aa)
seg (db=Seg db_id=seg from=41 to=56)
Uncharacterized protein {ECO:0000313|EMBL:KKS56807.1}; TaxID=1619039 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWA2_42_32.;"
ACD12_160_3

Not on your lists

2428..3618
DNA (1191bp) protein (397aa)
Elongation factor Tu n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YFW5_THEYD (db=UNIREF evalue=5.0e-173 bit_score=610.0 identity=74.49 coverage=98.7405541561713)
tuf; elongation factor Tu (EC:3.6.5.3)
tuf; elongation factor Tu (EC:3.6.5.3)
EFACTOR_GTP (db=PatternScan db_id=PS00301 from=51 to=66 evalue=0.0 interpro_id=IPR000795 interpro_description=Protein synthesis factor, GTP-binding GO=Molecular Function: GTPase activity (GO:0003924), Molecular Function: GTP binding (GO:0005525))
ACD12_160_4
GWA2_OD1_42_32, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists


3623..3976
DNA (354bp) protein (118aa)
rpsJ; 30S ribosomal protein S10
RIBOSOMAL_S10 (db=PatternScan db_id=PS00361 from=44 to=59 evalue=0.0 interpro_id=IPR018268 interpro_description=Ribosomal protein S10, conserved site GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rpsJ_bact: ribosomal protein S10 (db=HMMTigr db_id=TIGR01049 from=19 to=117 evalue=1.4e-59 interpro_id=IPR005731 interpro_description=Ribosomal protein S10 subgroup GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
30S RIBOSOMAL PROTEIN S10 (db=HMMPanther db_id=PTHR11700:SF2 from=20 to=117 evalue=1.6e-50 interpro_id=IPR005731 interpro_description=Ribosomal protein S10 subgroup GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
Displaying 4 items

View Taxonomy