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ACD12_164

Alias: ACD12_388229.3046.6

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD12_164_1
ACD12, ACD12, ACD12, ACD12, Microgenomates, Bacteria

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1..69
DNA (69bp) protein (23aa)
seg (db=Seg db_id=seg from=12 to=22)
ACD12_164_2

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78..440
DNA (363bp) protein (121aa)
rplR; 50S ribosomal protein L18
seg (db=Seg db_id=seg from=64 to=79)
L18_bact: ribosomal protein L18 (db=HMMTigr db_id=TIGR00060 from=5 to=120 evalue=5.2e-36 interpro_id=IPR004389 interpro_description=Ribosomal protein L18, bacterial GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Translational machinery components (db=superfamily db_id=SSF53137 from=22 to=120 evalue=7.1e-30)
ACD12_164_3

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437..895
DNA (459bp) protein (153aa)
30S ribosomal protein S5
RIBOSOMAL S SUBUNIT (db=HMMPanther db_id=PTHR13718 from=4 to=150 evalue=3.1e-49 interpro_id=IPR000851 interpro_description=Ribosomal protein S5 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
30S RIBOSOMAL PROTEIN S5 (db=HMMPanther db_id=PTHR13718:SF2 from=4 to=150 evalue=3.1e-49)
Ribosomal_S5 (db=HMMPfam db_id=PF00333 from=11 to=76 evalue=2.9e-26 interpro_id=IPR013810 interpro_description=Ribosomal protein S5, N-terminal GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD12_164_4

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904..1350
DNA (447bp) protein (149aa)
rplO; 50S ribosomal protein L15
50S ribosomal protein L15 n=2 Tax=Granulicatella RepID=C8NH05_9LACT (db=UNIREF evalue=2.0e-11 bit_score=71.2 identity=40.87 coverage=73.1543624161074)
seg (db=Seg db_id=seg from=14 to=34)
Ribosomal proteins L15p and L18e (db=superfamily db_id=SSF52080 from=2 to=147 evalue=4.0e-21 interpro_id=IPR021131 interpro_description=Ribosomal protein L18e/L15)
ACD12_164_5

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1354..2643
DNA (1290bp) protein (430aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=146 to=168)
transmembrane_regions (db=TMHMM db_id=tmhmm from=175 to=197)
transmembrane_regions (db=TMHMM db_id=tmhmm from=207 to=229)
ACD12_164_6

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2669..2842
DNA (174bp) protein (58aa)
50S ribosomal protein L33
Ribosomal_L33 (db=HMMPfam db_id=PF00471 from=8 to=54 evalue=6.7e-18 interpro_id=IPR001705 interpro_description=Ribosomal protein L33 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Zn-binding ribosomal proteins (db=superfamily db_id=SSF57829 from=3 to=54 evalue=7.4e-15 interpro_id=IPR011332 interpro_description=Ribosomal protein, zinc-binding domain GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rpmG_bact: ribosomal protein L33 (db=HMMTigr db_id=TIGR01023 from=1 to=55 evalue=2.1e-13 interpro_id=IPR001705 interpro_description=Ribosomal protein L33 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Displaying 6 items

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