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ACD12_171

Alias: ACD12_105730.4326.12

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD12_171_1

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comp(3..155)
DNA (153bp) protein (51aa)
coiled-coil (db=Coil db_id=coil from=19 to=47 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=21)
seg (db=Seg db_id=seg from=4 to=20)
Uncharacterized protein {ECO:0000313|EMBL:EKE15429.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_171_2

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1366..1920
DNA (555bp) protein (185aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=24 to=43)
transmembrane_regions (db=TMHMM db_id=tmhmm from=47 to=64)
seg (db=Seg db_id=seg from=123 to=139)
Uncharacterized protein {ECO:0000313|EMBL:EKE15425.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_171_3

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comp(1865..2491)
DNA (627bp) protein (209aa)
hypothetical protein
UPF0278 protein HG1285_00735 n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UVW4_9AQUI (db=UNIREF evalue=1.0e-23 bit_score=112.0 identity=35.27 coverage=90.9090909090909)
seg (db=Seg db_id=seg from=30 to=43)
UPF0278 (db=HMMPfam db_id=PF08745 from=4 to=207 evalue=2.9e-45)
ACD12_171_4

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comp(2493..3590)
DNA (1098bp) protein (366aa)
dnaN; DNA polymerase III subunit beta (EC:2.7.7.7)
seg (db=Seg db_id=seg from=16 to=30)
seg (db=Seg db_id=seg from=84 to=98)
dnan: DNA polymerase III, beta subunit (db=HMMTigr db_id=TIGR00663 from=1 to=363 evalue=2.6e-61 interpro_id=IPR001001 interpro_description=DNA polymerase III, beta chain GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Biological Process: DNA replication (GO:0006260), Molecular Function: 3'-5' exonuclease activity (GO:0008408), Cellular Component: DNA polymerase III complex (GO:0009360))
ACD12_171_5

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comp(3712..4083)
DNA (372bp) protein (124aa)
chromosomal replication initiator protein dnaA
TrpR-like (db=superfamily db_id=SSF48295 from=15 to=121 evalue=2.0e-25 interpro_id=IPR010921 interpro_description=Trp repressor/replication initiator GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
no description (db=HMMSmart db_id=SM00760 from=29 to=98 evalue=1.2e-21 interpro_id=IPR013159 interpro_description=Chromosomal replication initiator, DnaA C-terminal GO=Molecular Function: ATP binding (GO:0005524), Biological Process: DNA replication initiation (GO:0006270), Biological Process: regulation of DNA replication (GO:0006275), Molecular Function: sequence-specific DNA binding (GO:0043565))
no description (db=Gene3D db_id=G3DSA:1.10.1750.10 from=16 to=119 evalue=2.4e-21)
ACD12_171_6
GWA2_OP11_34_18_partial, Roizmanbacteria, Microgenomates, Bacteria

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comp(4197..4364)
DNA (168bp) protein (56aa)
Bac_DnaA (db=HMMPfam db_id=PF00308 from=2 to=48 evalue=4.5e-10 interpro_id=IPR013317 interpro_description=Chromosomal replication control, initiator (DnaA)/regulator (Hda))
Chromosomal replication initiator protein DnaA Tax=GWA2_OP11_34_18_partial
Displaying 6 items

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