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ACD12_182

Alias: ACD12_99093.9692.12

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD12_182_1

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3..443
DNA (441bp) protein (147aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=26)
seg (db=Seg db_id=seg from=12 to=25)
Uncharacterized protein {ECO:0000313|EMBL:EKE13641.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_182_2
GWA2_OP11_47_9, Gottesmanbacteria, Microgenomates, Bacteria

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505..1908
DNA (1404bp) protein (468aa)
505..1908 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:KKU88733.1}; TaxID=1618445 species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWA2_47_9.;"
ACD12_182_3
ACD12, ACD12, ACD12, ACD12, Microgenomates, Bacteria

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1908..2255
DNA (348bp) protein (116aa)
coiled-coil (db=Coil db_id=coil from=31 to=52 evalue=NA)
seg (db=Seg db_id=seg from=41 to=52)
ACD12_182_4

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2243..2620
DNA (378bp) protein (126aa)
seg (db=Seg db_id=seg from=99 to=111)
transmembrane_regions (db=TMHMM db_id=tmhmm from=69 to=91)
transmembrane_regions (db=TMHMM db_id=tmhmm from=26 to=48)
Uncharacterized protein {ECO:0000313|EMBL:EKE13640.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_182_5
GWC2_OP11_ACD12-rel_34_23, Roizmanbacteria, Microgenomates, Bacteria

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2688..4346
DNA (1659bp) protein (553aa)
dihydroorotate dehydrogenase 2, nonfunctional
dihydroorotate dehydrogenase 2 n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B255A (db=UNIREF evalue=1.0e-64 bit_score=251.0 identity=39.31 coverage=66.003616636528)
transmembrane_regions (db=TMHMM db_id=tmhmm from=151 to=170)
transmembrane_regions (db=TMHMM db_id=tmhmm from=90 to=112)
ACD12_182_6

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4425..4871
DNA (447bp) protein (149aa)
NUDIX hydrolase n=1 Tax=Hydrogenobacter thermophilus TK-6 RepID=D3DJ14_HYDTT (db=UNIREF evalue=2.0e-15 bit_score=84.7 identity=39.86 coverage=83.8926174496644)
MutT/nudix family protein
NUDIX_BOX (db=PatternScan db_id=PS00893 from=49 to=70 evalue=0.0 interpro_id=IPR020084 interpro_description=NUDIX hydrolase, conserved site GO=Molecular Function: hydrolase activity (GO:0016787))
Nudix (db=superfamily db_id=SSF55811 from=5 to=148 evalue=1.1e-19 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
ACD12_182_7

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comp(5584..6789)
DNA (1206bp) protein (402aa)
Aspartate transaminase (EC:2.6.1.1)
Aspartate transaminase (EC:2.6.1.1)
AspC3 n=2 Tax=Clostridium kluyveri RepID=A5N8I1_CLOK5 (db=UNIREF evalue=1.0e-119 bit_score=433.0 identity=51.02 coverage=97.2636815920398)
coiled-coil (db=Coil db_id=coil from=381 to=402 evalue=NA)
ACD12_182_8

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comp(6836..7282)
DNA (447bp) protein (149aa)
phosphoenolpyruvate carboxylase
Phosphoenolpyruvate carboxylase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HVN3_9BACT (db=UNIREF evalue=4.0e-30 bit_score=133.0 identity=47.97 coverage=98.6577181208054)
seg (db=Seg db_id=seg from=104 to=115)
PEPcase (db=HMMPfam db_id=PF00311 from=1 to=148 evalue=1.1e-30 interpro_id=IPR021135 interpro_description=Phosphoenolpyruvate carboxylase, C-terminal region GO=Biological Process: tricarboxylic acid cycle (GO:0006099), Molecular Function: phosphoenolpyruvate carboxylase activity (GO:0008964))
PEP + HCO3 to OAA + Pi Together you can bypass pyruvate kinase with malic enzyme and PEP carboxylase Used for fermentative aa synthesis to get lysine/threonine from OAA in Cornybacterium glutamicum Part of PEP-pyruvate-OAA node- highly relevant switch for carbon flux distribution in central metabolism. Archaea have a different amino acid structure than bacteria nad plants. (Sauer, 2005) kelly wrighton (11/15/12)
ACD12_182_9

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comp(8987..9730)
DNA (744bp) protein (248aa)
bacA; undecaprenol kinase
transmembrane_regions (db=TMHMM db_id=tmhmm from=33 to=55)
transmembrane_regions (db=TMHMM db_id=tmhmm from=60 to=79)
seg (db=Seg db_id=seg from=199 to=217)
Displaying 9 items

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