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ACD12_213

Alias: ACD12_102196.3737.5

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD12_213_1

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comp(1..546)
DNA (546bp) protein (182aa)
Nickel (Ni2+) ABC superfamily ATP binding cassette transporter binding protein n=1 Tax=Fusobacterium nucleatum subsp. polymorphum ATCC 10953 RepID=A5TU33_FUSNP (db=UNIREF evalue=4.0e-11 bit_score=70.9 identity=36.19 coverage=47.8021978021978)
nickel ABC transporter, nickel/metallophore periplasmic binding protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
seg (db=Seg db_id=seg from=23 to=40)
ACD12_213_2

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comp(543..761)
DNA (219bp) protein (73aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
transmembrane_regions (db=TMHMM db_id=tmhmm from=49 to=71)
seg (db=Seg db_id=seg from=3 to=22)
seg (db=Seg db_id=seg from=24 to=37)
ACD12_213_3

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comp(758..1156)
DNA (399bp) protein (133aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
seg (db=Seg db_id=seg from=114 to=125)
transmembrane_regions (db=TMHMM db_id=tmhmm from=33 to=51)
transmembrane_regions (db=TMHMM db_id=tmhmm from=61 to=83)
ACD12_213_4

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comp(1373..2629)
DNA (1257bp) protein (419aa)
Excinuclease ABC subunit C
UvrC_HhH_N (db=HMMPfam db_id=PF08459 from=267 to=404 evalue=1.7e-37 interpro_id=IPR001162 interpro_description=Excinuclease ABC, C subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: nuclease activity (GO:0004518), Biological Process: nucleotide-excision repair (GO:0006289))
GIY-YIG endonuclease (db=superfamily db_id=SSF82771 from=12 to=95 evalue=3.5e-17 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
no description (db=HMMSmart db_id=SM00465 from=13 to=93 evalue=4.7e-13 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
ACD12_213_5

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comp(2619..3770)
DNA (1152bp) protein (384aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=350 to=372)
seg (db=Seg db_id=seg from=285 to=297)
Cysteine proteinases (db=superfamily db_id=SSF54001 from=92 to=254 evalue=4.5e-15)
Displaying 5 items

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