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ACD12_214

Alias: ACD12_49037.10588.13

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD12_214_1

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comp(908..1615)
DNA (708bp) protein (236aa)
908..1615 - (rbs_motif=TAA rbs_spacer=10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE14244.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_214_2

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1902..2135
DNA (234bp) protein (78aa)
1902..2135 + (rbs_motif=TATAAT rbs_spacer=5bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE14241.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_214_3

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comp(2137..2598)
DNA (462bp) protein (154aa)
greA; transcription elongation factor GreA
Transcription elongation factor GreB n=1 Tax=Lactobacillus coleohominis 101-4-CHN RepID=C7XXQ7_9LACO (db=UNIREF evalue=7.0e-23 bit_score=109.0 identity=39.19 coverage=94.1558441558442)
GREAB_2 (db=PatternScan db_id=PS00830 from=115 to=131 evalue=0.0 interpro_id=IPR018151 interpro_description=Transcription elongation factor, GreA/GreB, conserved site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
GreA_GreB (db=HMMPfam db_id=PF01272 from=80 to=150 evalue=4.1e-23 interpro_id=IPR001437 interpro_description=Transcription elongation factor, GreA/GreB, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
ACD12_214_4

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comp(2671..3135)
DNA (465bp) protein (155aa)
Obg family GTPase CgtA
seg (db=Seg db_id=seg from=116 to=131)
GTP1_OBG (db=PatternScan db_id=PS00905 from=42 to=55 evalue=0.0 interpro_id=IPR006074 interpro_description=GTP1/OBG, conserved site GO=Molecular Function: GTP binding (GO:0005525))
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=152 evalue=1.1e-35)
ACD12_214_5
GWA2_OP11_35_19, Roizmanbacteria, Microgenomates, Bacteria

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comp(3171..3806)
DNA (636bp) protein (212aa)
GTPase obg
seg (db=Seg db_id=seg from=25 to=38)
DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED (db=HMMPanther db_id=PTHR11702 from=1 to=174 evalue=1.6e-53)
MITOCHONDRIAL GTPASE 2(YEAST)/OBG-RELATED (db=HMMPanther db_id=PTHR11702:SF3 from=1 to=174 evalue=1.6e-53 interpro_id=IPR014100 interpro_description=GTP-binding protein Obg/CgtA)
ACD12_214_6

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3894..4397
DNA (504bp) protein (168aa)
3894..4397 + (rbs_motif=TATA rbs_spacer=10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE14234.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_214_7

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comp(4401..5381)
DNA (981bp) protein (327aa)
Holliday junction DNA helicase RuvB
Holliday junction DNA helicase RuvB
Holliday junction ATP-dependent DNA helicase ruvB n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZ10_9FIRM (db=UNIREF evalue=2.0e-91 bit_score=339.0 identity=54.63 coverage=95.4128440366973)
seg (db=Seg db_id=seg from=224 to=245)
ACD12_214_8

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5456..5695
DNA (240bp) protein (80aa)
5456..5695 + (rbs_motif=TATAAT rbs_spacer=6bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE14236.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_214_9

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comp(5701..6273)
DNA (573bp) protein (191aa)
holliday junction DNA helicase RuvA (EC:3.6.4.12)
seg (db=Seg db_id=seg from=30 to=46)
ruvA: Holliday junction DNA helicase RuvA (db=HMMTigr db_id=TIGR00084 from=1 to=188 evalue=3.4e-38 interpro_id=IPR000085 interpro_description=Bacterial DNA recombination protein RuvA GO=Molecular Function: DNA helicase activity (GO:0003678), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
RuvA domain 2-like (db=superfamily db_id=SSF47781 from=66 to=143 evalue=8.6e-18 interpro_id=IPR010994 interpro_description=RuvA domain 2-like)
ACD12_214_10

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comp(6347..7540)
DNA (1194bp) protein (398aa)
eno; phosphopyruvate hydratase
seg (db=Seg db_id=seg from=144 to=165)
Enolase C-terminal domain-like (db=superfamily db_id=SSF51604 from=147 to=394 evalue=6.4e-41)
no description (db=Gene3D db_id=G3DSA:3.20.20.120 from=132 to=394 evalue=7.7e-40)
ACD12_214_11

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comp(7588..9912)
DNA (2325bp) protein (775aa)
Phosphoenolpyruvate synthase n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D4XXK7_9CHLR (db=UNIREF evalue=0.0 bit_score=743.0 identity=49.17 coverage=96.9032258064516)
phosphoenolpyruvate synthase
phosphoenolpyruvate synthase
seg (db=Seg db_id=seg from=458 to=473)
ACD12_214_12

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9988..10230
DNA (243bp) protein (81aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=49 to=71)
Uncharacterized protein {ECO:0000313|EMBL:EKE14240.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 12 items

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