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ACD12_239

Alias: ACD12_65028.4413.14

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD12_239_1

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comp(1..336)
DNA (336bp) protein (112aa)
prolyl-tRNA synthetase n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI00017427C7 (db=UNIREF evalue=1.0e-20 bit_score=102.0 identity=42.61 coverage=99.1071428571429)
proS; prolyl-tRNA synthetase (EC:6.1.1.15)
PROLYL-TRNA SYNTHETASE (db=HMMPanther db_id=PTHR11451:SF3 from=1 to=92 evalue=2.1e-17)
TRNA SYNTHETASE-RELATED (db=HMMPanther db_id=PTHR11451 from=1 to=92 evalue=2.1e-17)
ACD12_239_2

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comp(1049..1285)
DNA (237bp) protein (79aa)
seg (db=Seg db_id=seg from=60 to=77)
transmembrane_regions (db=TMHMM db_id=tmhmm from=53 to=75)
Uncharacterized protein {ECO:0000313|EMBL:EKE14017.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_239_3

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1420..1950
DNA (531bp) protein (177aa)
transposase
Transposase IS200-like (db=superfamily db_id=SSF143422 from=9 to=170 evalue=1.6e-18)
hypothetical protein alias=ACD12_C00239G00003,ACD12_65028.4413.14G0003,ACD12_65028.4413.14_3 id=5327 tax=ACD12 species=Prosthecochloris aestuarii genus=Prosthecochloris taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi organism_group=OP11 organism_desc=
Uncharacterized protein {ECO:0000313|EMBL:EKE14018.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_239_4

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comp(2025..2579)
DNA (555bp) protein (185aa)
cytidylate kinase (EC:2.7.4.14); K00945 cytidylate kinase [EC:2.7.4.14] (db=KEGG evalue=6.0e-13 bit_score=77.0 identity=31.11 coverage=94.0540540540541)
coiled-coil (db=Coil db_id=coil from=61 to=82 evalue=NA)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=5 to=180 evalue=6.4e-14)
cytidylate kinase (EC:2.7.4.14); K00945 cytidylate kinase [EC:2.7.4.14] alias=ACD12_C00239G00004,ACD12_65028.4413.14G0004,ACD12_65028.4413.14_4 id=5328 tax=ACD12 species=Ferroglobus placidus genus=Ferroglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota organism_group=OP11 organism_desc=
ACD12_239_5

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comp(2583..3638)
DNA (1056bp) protein (352aa)
membrane-associated zinc metalloprotease
transmembrane_regions (db=TMHMM db_id=tmhmm from=327 to=349)
transmembrane_regions (db=TMHMM db_id=tmhmm from=3 to=25)
transmembrane_regions (db=TMHMM db_id=tmhmm from=277 to=299)
ACD12_239_6

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comp(3646..4203)
DNA (558bp) protein (186aa)
ribosome recycling factor
seg (db=Seg db_id=seg from=111 to=128)
coiled-coil (db=Coil db_id=coil from=132 to=160 evalue=NA)
RIBOSOME RECYCLING FACTOR (RIBOSOME RELEASING FACTOR) (RRF) (db=HMMPanther db_id=PTHR20982:SF3 from=3 to=185 evalue=2.6e-54 interpro_id=IPR015998 interpro_description=Ribosome recycling factor, bacterial-like GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: translational termination (GO:0006415))
ACD12_239_7

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comp(4212..4451)
DNA (240bp) protein (80aa)
hypothetical protein
Elongation factor Ts (EF-Ts), dimerisation domain (db=superfamily db_id=SSF54713 from=1 to=79 evalue=1.1e-15 interpro_id=IPR014039 interpro_description=Translation elongation factor EFTs/EF1B, dimerisation GO=Molecular Function: translation elongation factor activity (GO:0003746), Cellular Component: intracellular (GO:0005622), Biological Process: translational elongation (GO:0006414))
no description (db=Gene3D db_id=G3DSA:3.30.479.20 from=1 to=78 evalue=5.9e-15 interpro_id=IPR014039 interpro_description=Translation elongation factor EFTs/EF1B, dimerisation GO=Molecular Function: translation elongation factor activity (GO:0003746), Cellular Component: intracellular (GO:0005622), Biological Process: translational elongation (GO:0006414))
EF_TS (db=HMMPfam db_id=PF00889 from=1 to=77 evalue=6.0e-15 interpro_id=IPR014039 interpro_description=Translation elongation factor EFTs/EF1B, dimerisation GO=Molecular Function: translation elongation factor activity (GO:0003746), Cellular Component: intracellular (GO:0005622), Biological Process: translational elongation (GO:0006414))
Displaying 7 items

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