ggKbase home page

ACD12_254

Alias: ACD12_96880.12842.15

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD12_254_1

Not on your lists

comp(673..999)
DNA (327bp) protein (109aa)
673..999 - (rbs_motif=TAAT rbs_spacer=7bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE13694.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_254_2

Not on your lists

comp(1123..1404)
DNA (282bp) protein (94aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=41 to=58)
Uncharacterized protein {ECO:0000313|EMBL:EKE13695.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_254_3

Not on your lists

1493..2110
DNA (618bp) protein (206aa)
peptidoglycan-binding lysin domain-containing protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=29 to=51)
seg (db=Seg db_id=seg from=30 to=45)
no description (db=HMMSmart db_id=SM00257 from=157 to=204 evalue=2.8e-10 interpro_id=IPR002482 interpro_description=Peptidoglycan-binding Lysin subgroup GO=Biological Process: cell wall macromolecule catabolic process (GO:0016998))
ACD12_254_4

Not on your lists

2315..2881
DNA (567bp) protein (189aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=17 to=39)
seg (db=Seg db_id=seg from=99 to=109)
SC protease {ECO:0000313|EMBL:EKE14650.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_254_5

Not on your lists

2886..3101
DNA (216bp) protein (72aa)
2886..3101 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE13690.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_254_6

Not on your lists

comp(3082..4164)
DNA (1083bp) protein (361aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=326 to=357)
seg (db=Seg db_id=seg from=89 to=99)
seg (db=Seg db_id=seg from=212 to=240)
seg (db=Seg db_id=seg from=299 to=314)
ACD12_254_7

Not on your lists

comp(4161..4964)
DNA (804bp) protein (268aa)
family 2 glycosyl transferase
transmembrane_regions (db=TMHMM db_id=tmhmm from=234 to=256)
seg (db=Seg db_id=seg from=54 to=70)
seg (db=Seg db_id=seg from=226 to=237)
ACD12_254_8

Not on your lists

comp(5023..5427)
DNA (405bp) protein (135aa)
Glycosyltransferase
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=6 to=134 evalue=3.5e-11)
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526 from=30 to=134 evalue=9.6e-09)
MANNOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526:SF29 from=30 to=134 evalue=9.6e-09)
ACD12_254_9

Not on your lists

comp(6015..7949)
DNA (1935bp) protein (645aa)
polysaccharide biosynthesis protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=244 to=266)
seg (db=Seg db_id=seg from=339 to=354)
seg (db=Seg db_id=seg from=256 to=266)
ACD12_254_10

Not on your lists

comp(7946..8716)
DNA (771bp) protein (257aa)
family 2 glycosyl transferase
seg (db=Seg db_id=seg from=93 to=106)
transmembrane_regions (db=TMHMM db_id=tmhmm from=228 to=250)
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=1 to=227 evalue=2.2e-21)
ACD12_254_11

Not on your lists

8862..11354
DNA (2493bp) protein (831aa)
PGAP1 family protein
PGAP1 family protein n=1 Tax=Chloroflexus aggregans DSM 9485 RepID=B8G4J3_CHLAD (db=UNIREF evalue=2.0e-21 bit_score=108.0 identity=27.3 coverage=40.1925391095066)
transmembrane_regions (db=TMHMM db_id=tmhmm from=798 to=820)
seg (db=Seg db_id=seg from=785 to=796)
ACD12_254_12

Not on your lists

comp(11404..12096)
DNA (693bp) protein (231aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
seg (db=Seg db_id=seg from=8 to=19)
Uncharacterized protein {ECO:0000313|EMBL:EKE13688.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_254_13

Not on your lists

12362..12880
DNA (519bp) protein (173aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=13 to=22)
seg (db=Seg db_id=seg from=59 to=97)
Uncharacterized protein {ECO:0000313|EMBL:EKE13689.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 13 items

View Taxonomy