ggKbase home page

ACD12_260

Alias: ACD12_52805.2891.9

Search features with annotation key words

Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD12_260_1

Not on your lists

comp(3..755)
DNA (753bp) protein (251aa)
putative Tyrosine recombinase xerD
seg (db=Seg db_id=seg from=64 to=75)
DNA breaking-rejoining enzymes (db=superfamily db_id=SSF56349 from=109 to=251 evalue=6.2e-32 interpro_id=IPR011010 interpro_description=DNA breaking-rejoining enzyme, catalytic core GO=Molecular Function: DNA binding (GO:0003677))
no description (db=Gene3D db_id=G3DSA:1.10.443.10 from=114 to=251 evalue=1.6e-23 interpro_id=IPR013762 interpro_description=Integrase-like, catalytic core, phage GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: DNA integration (GO:0015074))
ACD12_260_2

Not on your lists


948..1241
DNA (294bp) protein (98aa)
SSU ribosomal protein S15P
SSU ribosomal protein S15P n=1 Tax=Synergistetes bacterium SGP1 RepID=D4M9C6_9BACT (db=UNIREF evalue=8.0e-18 bit_score=92.8 identity=59.72 coverage=72.4489795918367)
seg (db=Seg db_id=seg from=3 to=15)
coiled-coil (db=Coil db_id=coil from=28 to=49 evalue=NA)
ACD12_260_3

Not on your lists

1253..1783
DNA (531bp) protein (177aa)
hypothetical protein
DUF88 (db=HMMPfam db_id=PF01936 from=8 to=155 evalue=5.3e-35)
hypothetical protein alias=ACD12_C00260G00003,ACD12_52805.2891.9G0003,ACD12_52805.2891.9_3 id=5464 tax=ACD12 species=Halorhabdus utahensis genus=Halorhabdus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota organism_group=OP11 organism_desc=
Uncharacterized protein {ECO:0000313|EMBL:EKE14173.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_260_4

Not on your lists

1905..2927
DNA (1023bp) protein (341aa)
Pnp; polynucleotide phosphorylase
Polyribonucleotide nucleotidyltransferase, RNA binding domain family n=1 Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7R8T2_9THEO (db=UNIREF evalue=3.0e-73 bit_score=279.0 identity=45.99 coverage=93.2551319648094)
coiled-coil (db=Coil db_id=coil from=285 to=306 evalue=NA)
seg (db=Seg db_id=seg from=287 to=298)
Displaying 4 items

View Taxonomy