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ACD12_335

Alias: ACD12_61366.3602.6

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD12_335_1

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comp(52..267)
DNA (216bp) protein (72aa)
52..267 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE14060.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_335_2

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comp(313..495)
DNA (183bp) protein (61aa)
313..495 - (rbs_motif=TAA rbs_spacer=11bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE14061.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_335_3

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566..2335
DNA (1770bp) protein (590aa)
hypothetical protein
hypothetical protein
DNA primase n=5 Tax=Dehalococcoides RepID=Q3Z903_DEHE1 (db=UNIREF evalue=3.0e-91 bit_score=340.0 identity=33.33 coverage=97.4576271186441)
coiled-coil (db=Coil db_id=coil from=413 to=434 evalue=NA)
ACD12_335_4

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2349..2951
DNA (603bp) protein (201aa)
RNA polymerase sigma factor rpoD
RNA polymerase sigma factor n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GBZ7_9FIRM (db=UNIREF evalue=8.0e-35 bit_score=149.0 identity=49.14 coverage=84.5771144278607)
coiled-coil (db=Coil db_id=coil from=116 to=137 evalue=NA)
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=87 to=182 evalue=8.0e-36 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
ACD12_335_5

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2890..3531
DNA (642bp) protein (214aa)
RNA polymerase sigma factor n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FXF0_9FIRM (db=UNIREF evalue=3.0e-74 bit_score=281.0 identity=63.94 coverage=96.7289719626168)
RpoD family RNA polymerase sigma factor
coiled-coil (db=Coil db_id=coil from=174 to=195 evalue=NA)
SIGMA70_2 (db=PatternScan db_id=PS00716 from=173 to=199 evalue=0.0 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
ACD12_335_6
GWC2_OP11_ACD12-rel_34_23, Roizmanbacteria, Microgenomates, Bacteria

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3539..3634
DNA (96bp) protein (32aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=30)
Uncharacterized protein {ECO:0000313|EMBL:KKP61424.1}; TaxID=1618484 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWC2_34_23.;"
Displaying 6 items

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