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ACD12_354

Alias: ACD12_161777.2424.6

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD12_354_1

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comp(3..365)
DNA (363bp) protein (121aa)
membrane protein insertase
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=33 to=50)
transmembrane_regions (db=TMHMM db_id=tmhmm from=96 to=118)
ACD12_354_2

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comp(470..604)
DNA (135bp) protein (45aa)
seg (db=Seg db_id=seg from=27 to=42)
RIBOSOMAL_L34 (db=PatternScan db_id=PS00784 from=2 to=21 evalue=0.0 interpro_id=IPR020939 interpro_description=Ribosomal protein L34, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_L34 (db=HMMPfam db_id=PF00468 from=1 to=44 evalue=3.1e-21 interpro_id=IPR000271 interpro_description=Ribosomal protein L34 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rpmH_bact: ribosomal protein L34 (db=HMMTigr db_id=TIGR01030 from=1 to=44 evalue=1.1e-20 interpro_id=IPR000271 interpro_description=Ribosomal protein L34 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD12_354_3

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comp(634..1353)
DNA (720bp) protein (240aa)
Suspect SCG annotation. See neighboring gene [ACD12_354_4].
valyl-tRNA synthetase
Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BCW8_9FIRM (db=UNIREF evalue=1.0e-48 bit_score=196.0 identity=45.81 coverage=91.6666666666667)
seg (db=Seg db_id=seg from=137 to=159)
ACD12_354_4
GWA2_OP11_nov_36_23, Roizmanbacteria, Microgenomates, Bacteria

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comp(1421..2458)
DNA (1038bp) protein (346aa)
hypothetical protein
seg (db=Seg db_id=seg from=320 to=332)
seg (db=Seg db_id=seg from=268 to=281)
VALYL-TRNA SYNTHETASE (db=HMMPanther db_id=PTHR11946:SF5 from=1 to=319 evalue=6.7e-120 interpro_id=IPR002303 interpro_description=Valyl-tRNA synthetase, class Ia GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: valine-tRNA ligase activity (GO:0004832), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: valyl-tRNA aminoacylation (GO:0006438))
Displaying 4 items

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