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ACD37_27

Alias: ACD37_241949.3569.5

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD37_27_1
R_OP11_Gottesmanbacteria_39_12, Gottesmanbacteria, Microgenomates, Bacteria

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comp(3..608)
DNA (606bp) protein (202aa)
seg (db=Seg db_id=seg from=99 to=113)
seg (db=Seg db_id=seg from=9 to=24)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Pectin lyase-like (db=superfamily db_id=SSF51126 from=57 to=202 evalue=2.5e-17 interpro_id=IPR011050 interpro_description=Pectin lyase fold/virulence factor)
ACD37_27_2

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comp(605..1003)
DNA (399bp) protein (133aa)
605..1003 - (rbs_motif=TAA rbs_spacer=3bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD86548.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD37_27_3
GWD2_OP11_45_10, Collierbacteria, Microgenomates, Bacteria

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comp(1040..1591)
DNA (552bp) protein (184aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
transmembrane_regions (db=TMHMM db_id=tmhmm from=39 to=61)
transmembrane_regions (db=TMHMM db_id=tmhmm from=81 to=103)
seg (db=Seg db_id=seg from=2 to=26)
ACD37_27_4

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1711..1917
DNA (207bp) protein (69aa)
seg (db=Seg db_id=seg from=50 to=61)
no description (db=Gene3D db_id=G3DSA:1.10.260.40 from=9 to=68 evalue=2.9e-17)
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=1 to=68 evalue=2.5e-16 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
HTH_3 (db=HMMPfam db_id=PF01381 from=13 to=67 evalue=1.5e-15 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
ACD37_27_5

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2665..2820
DNA (156bp) protein (52aa)
2665..2820 + (rbs_motif=TAA rbs_spacer=5bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD86544.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD37_27_6

Not on your lists

2924..3178
DNA (255bp) protein (85aa)
2924..3178 + (rbs_motif=ATA rbs_spacer=9bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD86545.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD37_27_7

Not on your lists

3138..3602
DNA (465bp) protein (155aa)
coiled-coil (db=Coil db_id=coil from=56 to=77 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKD86546.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 7 items

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