Alias: ACD37_98217.2426.5
name | lists | location/seqs | annotations | notes |
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ACD37_43_1
GWB1_OP11_39_7, Levybacteria, Microgenomates, Bacteria
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Not on your lists |
3..287
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rplV; 50S ribosomal protein L22
coiled-coil (db=Coil db_id=coil from=57 to=78 evalue=NA)
seg (db=Seg db_id=seg from=62 to=88)
Ribosomal_L22 (db=HMMPfam db_id=PF00237 from=1 to=60 evalue=1.5e-15 interpro_id=IPR001063 interpro_description=Ribosomal protein L22/L17 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD37_43_2
Microgenomates bacterium GW2011_GWC1_39_7, Microgenomates, Bacteria
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Not on your lists |
271..909
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30S ribosomal protein S3
seg (db=Seg db_id=seg from=163 to=175)
RIBOSOMAL_S3 (db=PatternScan db_id=PS00548 from=171 to=205 evalue=0.0 interpro_id=IPR018280 interpro_description=Ribosomal protein S3, conserved site GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rpsC_bact: ribosomal protein S3 (db=HMMTigr db_id=TIGR01009 from=1 to=212 evalue=1.8e-63 interpro_id=IPR005704 interpro_description=Ribosomal protein S3, bacterial GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
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ACD37_43_3
GWB1_OP11_39_7, Levybacteria, Microgenomates, Bacteria
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Not on your lists |
999..1415
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50S ribosomal protein L16
RIBOSOMAL_L16_1 (db=PatternScan db_id=PS00586 from=60 to=71 evalue=0.0 interpro_id=IPR020798 interpro_description=Ribosomal protein L16, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rplP_bact: ribosomal protein L16 (db=HMMTigr db_id=TIGR01164 from=2 to=128 evalue=1.4e-65 interpro_id=IPR000114 interpro_description=Ribosomal protein L16 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
Ribosomal protein L16p/L10e (db=superfamily db_id=SSF54686 from=3 to=135 evalue=3.6e-52 interpro_id=IPR016180 interpro_description=Ribosomal protein L10e/L16 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD37_43_4
GWB1_OP11_39_7, Levybacteria, Microgenomates, Bacteria
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Not on your lists |
1420..1653
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coiled-coil (db=Coil db_id=coil from=14 to=35 evalue=NA)
Ribosomal_L29 (db=HMMPfam db_id=PF00831 from=8 to=61 evalue=1.3e-10 interpro_id=IPR001854 interpro_description=Ribosomal protein L29 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal protein L29 (L29p) (db=superfamily db_id=SSF46561 from=4 to=63 evalue=6.3e-09 interpro_id=IPR001854 interpro_description=Ribosomal protein L29 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
L29: ribosomal protein L29 (db=HMMTigr db_id=TIGR00012 from=8 to=63 evalue=5.6e-05 interpro_id=IPR001854 interpro_description=Ribosomal protein L29 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD37_43_5
Microgenomates bacterium GW2011_GWC1_39_7, Microgenomates, Bacteria
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Not on your lists |
1680..1931
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30S ribosomal protein S17
seg (db=Seg db_id=seg from=31 to=43)
S17_bact: 30S ribosomal protein S17 (db=HMMTigr db_id=TIGR03635 from=3 to=74 evalue=8.8e-32 interpro_id=IPR019984 interpro_description=Ribosomal protein S17, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=1 to=78 evalue=7.3e-25 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold)
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ACD37_43_6
GWB1_OP11_39_7, Levybacteria, Microgenomates, Bacteria
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Not on your lists |
1990..2364
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50S ribosomal protein L14
RIBOSOMAL_L14 (db=PatternScan db_id=PS00049 from=60 to=86 evalue=0.0 interpro_id=IPR019972 interpro_description=Ribosomal protein L14 conserved site)
rplN_bact: ribosomal protein L14 (db=HMMTigr db_id=TIGR01067 from=1 to=124 evalue=1.7e-65 interpro_id=IPR005745 interpro_description=Ribosomal protein L14, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934))
50S/60S RIBOSOMAL PROTEIN L14/L23 (db=HMMPanther db_id=PTHR11761 from=1 to=124 evalue=5.5e-55 interpro_id=IPR000218 interpro_description=Ribosomal protein L14b/L23e GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD37_43_7
unknown
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Not on your lists |
2391..2459
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2391..2459 + (rbs_motif=None rbs_spacer=None)
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