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ACD37_55

Alias: ACD37_80533.14016.7

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD37_55_1

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3..1436
DNA (1434bp) protein (478aa)
hypothetical protein
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=311 to=449 evalue=1.4e-15 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
Acetyltransf_1 (db=HMMPfam db_id=PF00583 from=380 to=442 evalue=1.6e-10 interpro_id=IPR022610 interpro_description=GCN5-related N-acetyltransferase, C-terminal)
N-TERMINAL ACETYLTRANSFERASE (db=HMMPanther db_id=PTHR23091 from=377 to=449 evalue=1.8e-07)
ACD37_55_2

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1426..2133
DNA (708bp) protein (236aa)
Peptidase M15D vanX D-ala-D-ala dipeptidase n=1 Tax=Burkholderia graminis C4D1M RepID=B1FST1_9BURK (db=UNIREF evalue=9.0e-21 bit_score=103.0 identity=35.03 coverage=71.6101694915254)
D-alanyl-D-alanine dipeptidase
Hedgehog/DD-peptidase (db=superfamily db_id=SSF55166 from=28 to=221 evalue=7.6e-30 interpro_id=IPR009045 interpro_description=Hedgehog/DD-peptidase, zinc-binding motif)
no description (db=Gene3D db_id=G3DSA:3.30.1380.10 from=28 to=208 evalue=1.5e-22)
ACD37_55_3
R_OP11_Levybacteria_36_13, Levybacteria, Microgenomates, Bacteria

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2141..2914
DNA (774bp) protein (258aa)
histidyl-tRNA synthetase (EC:6.1.1.21)
seg (db=Seg db_id=seg from=242 to=254)
HISTIDYL-TRNA SYNTHETASE (db=HMMPanther db_id=PTHR11476 from=6 to=205 evalue=1.9e-68 interpro_id=IPR004516 interpro_description=Histidyl-tRNA synthetase, class IIa GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: histidine-tRNA ligase activity (GO:0004821), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: histidyl-tRNA aminoacylation (GO:0006427))
no description (db=Gene3D db_id=G3DSA:3.30.930.10 from=3 to=205 evalue=4.4e-56)
ACD37_55_4

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3036..3386
DNA (351bp) protein (117aa)
Suspect SCG annotation. See neighboring gene [ACD37_55_3].
hisS; histidyl-tRNA synthetase
HISTIDYL-TRNA SYNTHETASE (db=HMMPanther db_id=PTHR11476 from=1 to=116 evalue=2.1e-24 interpro_id=IPR004516 interpro_description=Histidyl-tRNA synthetase, class IIa GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: histidine-tRNA ligase activity (GO:0004821), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: histidyl-tRNA aminoacylation (GO:0006427))
Class II aaRS ABD-related (db=superfamily db_id=SSF52954 from=33 to=115 evalue=9.4e-13 interpro_id=IPR004154 interpro_description=Anticodon-binding GO=Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812), Molecular Function: ATP binding (GO:0005524), Biological Process: translation (GO:0006412))
ACD37_55_5

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3373..3654
DNA (282bp) protein (94aa)
excinuclease ABC C subunit domain-containing protein
GIY-YIG endonuclease (db=superfamily db_id=SSF82771 from=8 to=91 evalue=8.8e-14 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
GIY-YIG (db=HMMPfam db_id=PF01541 from=10 to=78 evalue=2.1e-13 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
excinuclease ABC C subunit domain protein; K07461 putative endonuclease alias=ACD37_C00055G00005,ACD37_80533.14016.7_5,ACD37_80533.14016.7G0005 id=41186 tax=ACD37 species=Chlorobium phaeobacteroides genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi organism_group=OP11 organism_desc=OP11
ACD37_55_6

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3654..4562
DNA (909bp) protein (303aa)
drug/metabolite exporter
transmembrane_regions (db=TMHMM db_id=tmhmm from=183 to=201)
transmembrane_regions (db=TMHMM db_id=tmhmm from=216 to=238)
transmembrane_regions (db=TMHMM db_id=tmhmm from=245 to=267)
ACD37_55_7

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comp(4552..4950)
DNA (399bp) protein (133aa)
NUDIX hydrolase
NUDIX hydrolase n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WQL6_ACTMD (db=UNIREF evalue=1.0e-10 bit_score=68.9 identity=37.82 coverage=85.7142857142857)
NUDIX_BOX (db=PatternScan db_id=PS00893 from=33 to=54 evalue=0.0 interpro_id=IPR020084 interpro_description=NUDIX hydrolase, conserved site GO=Molecular Function: hydrolase activity (GO:0016787))
Nudix (db=superfamily db_id=SSF55811 from=2 to=111 evalue=6.5e-26 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
ACD37_55_8

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comp(4955..5065)
DNA (111bp) protein (37aa)
4955..5065 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD85729.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD37_55_9

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5727..6026
DNA (300bp) protein (100aa)
hypothetical protein
seg (db=Seg db_id=seg from=68 to=83)
Ribosomal_L31 (db=HMMPfam db_id=PF01197 from=1 to=63 evalue=8.9e-26 interpro_id=IPR002150 interpro_description=Ribosomal protein L31 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
L31: ribosomal protein L31 (db=HMMTigr db_id=TIGR00105 from=1 to=67 evalue=1.8e-25 interpro_id=IPR002150 interpro_description=Ribosomal protein L31 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD37_55_10

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6034..6924
DNA (891bp) protein (297aa)
prfA; peptide chain release factor 1
coiled-coil (db=Coil db_id=coil from=29 to=50 evalue=NA)
seg (db=Seg db_id=seg from=18 to=44)
seg (db=Seg db_id=seg from=51 to=64)
ACD37_55_11

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comp(6912..8585)
DNA (1674bp) protein (558aa)
Transporter, CPA2 family
transmembrane_regions (db=TMHMM db_id=tmhmm from=356 to=375)
transmembrane_regions (db=TMHMM db_id=tmhmm from=324 to=346)
transmembrane_regions (db=TMHMM db_id=tmhmm from=295 to=317)
ACD37_55_12

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comp(8632..9573)
DNA (942bp) protein (314aa)
murB; UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LAD8_RUMHA (db=UNIREF evalue=1.0e-44 bit_score=184.0 identity=40.26 coverage=87.8980891719745)
seg (db=Seg db_id=seg from=288 to=301)
murB: UDP-N-acetylenolpyruvoylglucosamine re (db=HMMTigr db_id=TIGR00179 from=10 to=312 evalue=1.8e-61 interpro_id=IPR003170 interpro_description=UDP-N-acetylenolpyruvoylglucosamine reductase GO=Molecular Function: UDP-N-acetylmuramate dehydrogenase activity (GO:0008762), Biological Process: peptidoglycan biosynthetic process (GO:0009252), Biological Process: oxidation reduction (GO:0055114))
ACD37_55_13

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comp(9570..10688)
DNA (1119bp) protein (373aa)
Trypsin
protease Do n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI000174268D (db=UNIREF evalue=2.0e-34 bit_score=150.0 identity=42.6 coverage=69.1689008042895)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
seg (db=Seg db_id=seg from=4 to=17)
ACD37_55_14
GWA2_OP11_37_6_partial, Microgenomates, Bacteria

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comp(11063..12076)
DNA (1014bp) protein (338aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=25)
seg (db=Seg db_id=seg from=7 to=19)
seg (db=Seg db_id=seg from=188 to=197)
ACD37_55_15

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comp(12133..12378)
DNA (246bp) protein (82aa)
30S ribosomal protein S18
seg (db=Seg db_id=seg from=17 to=27)
Ribosomal_S18 (db=HMMPfam db_id=PF01084 from=23 to=75 evalue=2.5e-20 interpro_id=IPR001648 interpro_description=Ribosomal protein S18 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
S18: ribosomal protein S18 (db=HMMTigr db_id=TIGR00165 from=12 to=80 evalue=7.9e-19 interpro_id=IPR001648 interpro_description=Ribosomal protein S18 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD37_55_16

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comp(12466..13005)
DNA (540bp) protein (180aa)
hypothetical protein
seg (db=Seg db_id=seg from=120 to=155)
ssb: single-strand binding protein (db=HMMTigr db_id=TIGR00621 from=3 to=179 evalue=1.0e-48 interpro_id=IPR011344 interpro_description=Single-strand DNA-binding GO=Molecular Function: single-stranded DNA binding (GO:0003697), Biological Process: DNA replication (GO:0006260))
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=3 to=179 evalue=3.5e-48 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
ACD37_55_17

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comp(13081..13350)
DNA (270bp) protein (90aa)
seg (db=Seg db_id=seg from=19 to=31)
Ribosomal_S6 (db=HMMPfam db_id=PF01250 from=2 to=88 evalue=1.2e-17 interpro_id=IPR000529 interpro_description=Ribosomal protein S6 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
Ribosomal protein S6 (db=superfamily db_id=SSF54995 from=1 to=89 evalue=7.5e-13 interpro_id=IPR000529 interpro_description=Ribosomal protein S6 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
S6: ribosomal protein S6 (db=HMMTigr db_id=TIGR00166 from=1 to=88 evalue=8.6e-13 interpro_id=IPR000529 interpro_description=Ribosomal protein S6 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
Displaying 17 items

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