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ACD37_64

Alias: ACD37_362962.5924.7

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD37_64_1

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comp(229..678)
DNA (450bp) protein (150aa)
hypothetical protein
R3H (db=HMMPfam db_id=PF01424 from=99 to=149 evalue=1.3e-09 interpro_id=IPR001374 interpro_description=Single-stranded nucleic acid binding R3H GO=Molecular Function: nucleic acid binding (GO:0003676))
no description (db=HMMSmart db_id=SM00393 from=70 to=149 evalue=4.9e-09 interpro_id=IPR001374 interpro_description=Single-stranded nucleic acid binding R3H GO=Molecular Function: nucleic acid binding (GO:0003676))
R3H domain (db=superfamily db_id=SSF82708 from=89 to=149 evalue=6.3e-07)
ACD37_64_2

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comp(645..1136)
DNA (492bp) protein (164aa)
60 kDa inner membrane insertion protein n=1 Tax=Chloroflexus aggregans DSM 9485 RepID=B8G7S6_CHLAD (db=UNIREF evalue=8.0e-11 bit_score=69.3 identity=32.24 coverage=86.5853658536585)
membrane protein insertase, YidC/Oxa1 family, C-terminal domain
transmembrane_regions (db=TMHMM db_id=tmhmm from=58 to=80)
transmembrane_regions (db=TMHMM db_id=tmhmm from=108 to=130)
ACD37_64_3
GWA2_OP11_37_6_partial, Microgenomates, Bacteria

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comp(1105..1515)
DNA (411bp) protein (137aa)
membrane protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
seg (db=Seg db_id=seg from=97 to=104)
transmembrane_regions (db=TMHMM db_id=tmhmm from=30 to=52)
ACD37_64_4

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comp(1518..1730)
DNA (213bp) protein (71aa)
seg (db=Seg db_id=seg from=5 to=18)
DUF37 (db=HMMPfam db_id=PF01809 from=3 to=68 evalue=1.6e-15 interpro_id=IPR002696 interpro_description=Protein of unknown function DUF37)
Y2527_LEIXX_Q6ABV4; (db=BlastProDom db_id=PD004225 from=28 to=69 evalue=1.0e-05 interpro_id=IPR002696 interpro_description=Protein of unknown function DUF37)
Uncharacterized protein {ECO:0000313|EMBL:EKD86297.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD37_64_5

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comp(1723..2052)
DNA (330bp) protein (110aa)
coiled-coil (db=Coil db_id=coil from=83 to=104 evalue=NA)
Ribosomal protein S5 domain 2-like (db=superfamily db_id=SSF54211 from=6 to=106 evalue=1.3e-14 interpro_id=IPR020568 interpro_description=Ribosomal protein S5 domain 2-type fold)
Ribonuclease_P (db=HMMPfam db_id=PF00825 from=2 to=103 evalue=2.2e-14 interpro_id=IPR000100 interpro_description=Ribonuclease P GO=Molecular Function: tRNA binding (GO:0000049), Molecular Function: ribonuclease P activity (GO:0004526), Biological Process: tRNA processing (GO:0008033))
no description (db=Gene3D db_id=G3DSA:3.30.230.10 from=2 to=106 evalue=4.7e-11 interpro_id=IPR014721 interpro_description=Ribosomal protein S5 domain 2-type fold, subgroup)
ACD37_64_6

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comp(2052..2186)
DNA (135bp) protein (45aa)
Ribosomal_L34 (db=HMMPfam db_id=PF00468 from=2 to=44 evalue=7.2e-14 interpro_id=IPR000271 interpro_description=Ribosomal protein L34 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rpmH_bact: ribosomal protein L34 (db=HMMTigr db_id=TIGR01030 from=1 to=44 evalue=2.5e-09 interpro_id=IPR000271 interpro_description=Ribosomal protein L34 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Q4NZT1_9DELT_Q4NZT1; (db=BlastProDom db_id=PD003101 from=1 to=42 evalue=0.0005 interpro_id=IPR000271 interpro_description=Ribosomal protein L34 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal protein L34 {ECO:0000256|RuleBase:RU000566}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD37_64_7

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2309..3655
DNA (1347bp) protein (449aa)
chromosomal replication initiator protein DnaA
DNAA (db=PatternScan db_id=PS01008 from=403 to=422 evalue=0.0 interpro_id=IPR018312 interpro_description=Chromosomal replication control, initiator DnaA, conserved site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA replication origin binding (GO:0003688), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA replication initiation (GO:0006270), Biological Process: regulation of DNA replication (GO:0006275))
DnaA: chromosomal replication initiator prot (db=HMMTigr db_id=TIGR00362 from=9 to=441 evalue=2.5e-155 interpro_id=IPR001957 interpro_description=Chromosomal replication control, initiator DnaA GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA replication origin binding (GO:0003688), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA replication initiation (GO:0006270), Biological Process: regulation of DNA replication (GO:0006275))
Bac_DnaA (db=HMMPfam db_id=PF00308 from=114 to=326 evalue=2.5e-76 interpro_id=IPR013317 interpro_description=Chromosomal replication control, initiator (DnaA)/regulator (Hda))
ACD37_64_8

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3802..4920
DNA (1119bp) protein (373aa)
DNA polymerase III subunit beta (EC:2.7.7.7)
seg (db=Seg db_id=seg from=306 to=322)
no description (db=HMMSmart db_id=SM00480 from=18 to=366 evalue=4.1e-80 interpro_id=IPR001001 interpro_description=DNA polymerase III, beta chain GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Biological Process: DNA replication (GO:0006260), Molecular Function: 3'-5' exonuclease activity (GO:0008408), Cellular Component: DNA polymerase III complex (GO:0009360))
dnan: DNA polymerase III, beta subunit (db=HMMTigr db_id=TIGR00663 from=2 to=370 evalue=1.1e-77 interpro_id=IPR001001 interpro_description=DNA polymerase III, beta chain GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Biological Process: DNA replication (GO:0006260), Molecular Function: 3'-5' exonuclease activity (GO:0008408), Cellular Component: DNA polymerase III complex (GO:0009360))
ACD37_64_9

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comp(4904..5341)
DNA (438bp) protein (146aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
Uncharacterized protein {ECO:0000313|EMBL:EKD86302.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD37_64_10

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comp(5338..5730)
DNA (393bp) protein (131aa)
5338..5730 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD86303.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 10 items

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