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ACD37_74

Alias: ACD37_67550.3496.6

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD37_74_1

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2..292
DNA (291bp) protein (97aa)
def; peptide deformylase (EC:3.5.1.88)
Peptide deformylase (db=superfamily db_id=SSF56420 from=1 to=88 evalue=2.6e-21 interpro_id=IPR000181 interpro_description=Formylmethionine deformylase GO=Molecular Function: iron ion binding (GO:0005506), Biological Process: translation (GO:0006412), Molecular Function: peptide deformylase activity (GO:0042586))
Pep_deformylase (db=HMMPfam db_id=PF01327 from=3 to=73 evalue=4.2e-21 interpro_id=IPR000181 interpro_description=Formylmethionine deformylase GO=Molecular Function: iron ion binding (GO:0005506), Biological Process: translation (GO:0006412), Molecular Function: peptide deformylase activity (GO:0042586))
no description (db=Gene3D db_id=G3DSA:3.90.45.10 from=2 to=86 evalue=4.5e-17 interpro_id=IPR000181 interpro_description=Formylmethionine deformylase GO=Molecular Function: iron ion binding (GO:0005506), Biological Process: translation (GO:0006412), Molecular Function: peptide deformylase activity (GO:0042586))
ACD37_74_2

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comp(289..999)
DNA (711bp) protein (237aa)
Putative uncharacterized protein n=1 Tax=Roseobacter litoralis Och 149 RepID=A9HT04_9RHOB (db=UNIREF evalue=8.0e-38 bit_score=160.0 identity=41.59 coverage=91.1392405063291)
hypothetical protein
Ribulose-phoshate binding barrel (db=superfamily db_id=SSF51366 from=4 to=235 evalue=2.5e-09 interpro_id=IPR011060 interpro_description=Ribulose-phosphate binding barrel GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
BtpA (db=HMMPfam db_id=PF03437 from=145 to=233 evalue=4.0e-08 interpro_id=IPR005137 interpro_description=Photosystem I assembly BtpA)
ACD37_74_3
R_OP11_Levybacteria_39_10, Levybacteria, Microgenomates, Bacteria

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1057..1902
DNA (846bp) protein (282aa)
hypothetical protein
seg (db=Seg db_id=seg from=91 to=107)
Formyltransferase (db=superfamily db_id=SSF53328 from=1 to=201 evalue=6.3e-41 interpro_id=IPR002376 interpro_description=Formyl transferase, N-terminal GO=Biological Process: biosynthetic process (GO:0009058), Molecular Function: hydroxymethyl-, formyl- and related transferase activity (GO:0016742))
no description (db=Gene3D db_id=G3DSA:3.40.50.170 from=1 to=200 evalue=5.4e-35 interpro_id=IPR002376 interpro_description=Formyl transferase, N-terminal GO=Biological Process: biosynthetic process (GO:0009058), Molecular Function: hydroxymethyl-, formyl- and related transferase activity (GO:0016742))
ACD37_74_4

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comp(1906..2202)
DNA (297bp) protein (99aa)
seg (db=Seg db_id=seg from=24 to=39)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
transmembrane_regions (db=TMHMM db_id=tmhmm from=57 to=79)
Peptidase_M50 (db=HMMPfam db_id=PF02163 from=14 to=74 evalue=1.2e-09 interpro_id=IPR008915 interpro_description=Peptidase M50 GO=Molecular Function: metalloendopeptidase activity (GO:0004222), Biological Process: proteolysis (GO:0006508))
ACD37_74_5

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2624..2923
DNA (300bp) protein (100aa)
50S ribosomal protein L28
L28: ribosomal protein L28 (db=HMMTigr db_id=TIGR00009 from=1 to=58 evalue=1.8e-19 interpro_id=IPR001383 interpro_description=Ribosomal protein L28 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_L28 (db=HMMPfam db_id=PF00830 from=6 to=59 evalue=9.5e-19 interpro_id=IPR001383 interpro_description=Ribosomal protein L28 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
L28p-like (db=superfamily db_id=SSF143800 from=3 to=85 evalue=1.0e-18)
ACD37_74_6

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3031..3528
DNA (498bp) protein (166aa)
hypothetical protein
Transposase n=1 Tax=uncultured SUP05 cluster bacterium RepID=D1KE89_9GAMM (db=UNIREF evalue=7.0e-17 bit_score=89.7 identity=34.46 coverage=82.5301204819277)
Transposase IS200-like (db=superfamily db_id=SSF143422 from=3 to=159 evalue=5.6e-13)
Transposase_17 (db=HMMPfam db_id=PF01797 from=68 to=159 evalue=1.4e-11 interpro_id=IPR002686 interpro_description=Transposase IS200-like GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transposase activity (GO:0004803), Biological Process: transposition, DNA-mediated (GO:0006313))
Displaying 6 items

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