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ACD37_163

Alias: ACD37_15144.3934.9

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD37_163_1
RIFOXYC2_FULL_OP11_Curtissbacteria_41_11_curated, Curtissbacteria, Microgenomates, Bacteria

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56..310
DNA (255bp) protein (85aa)
seg (db=Seg db_id=seg from=7 to=22)
seg (db=Seg db_id=seg from=64 to=73)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg 7..22 Tax=RIFOXYC2_FULL_OP11_Curtissbacteria_41_11_curated
ACD37_163_2
GWC2_OP11_41_21, Curtissbacteria, Microgenomates, Bacteria

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461..1483
DNA (1023bp) protein (341aa)
hypothetical protein
Tfp pilus assembly protein, ATPase PilM (db=HMMPIR db_id=PIRSF019169 from=1 to=340 evalue=4.2e-61 interpro_id=IPR005883 interpro_description=Type IV pilus assembly protein PilM)
pilM: type IV pilus assembly protein PilM (db=HMMTigr db_id=TIGR01175 from=1 to=340 evalue=9.6e-50 interpro_id=IPR005883 interpro_description=Type IV pilus assembly protein PilM)
Competence_A (db=HMMPfam db_id=PF11104 from=42 to=174 evalue=5.2e-23)
ACD37_163_3
RIFOXYC2_FULL_OP11_Curtissbacteria_41_11_curated, Curtissbacteria, Microgenomates, Bacteria

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1570..2109
DNA (540bp) protein (180aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=24 to=46)
PilN (db=HMMPfam db_id=PF05137 from=4 to=145 evalue=6.5e-14 interpro_id=IPR007813 interpro_description=Fimbrial assembly)
transmembrane_regions 24..46 Tax=RIFOXYC2_FULL_OP11_Curtissbacteria_41_11_curated
ACD37_163_4
GWC2_OP11_41_21, Curtissbacteria, Microgenomates, Bacteria

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2106..2885
DNA (780bp) protein (260aa)
seg (db=Seg db_id=seg from=30 to=41)
coiled-coil (db=Coil db_id=coil from=48 to=76 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
seg (db=Seg db_id=seg from=181 to=190)
ACD37_163_5
RIFOXYC2_FULL_OP11_Curtissbacteria_41_11_curated, Curtissbacteria, Microgenomates, Bacteria

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comp(2890..3576)
DNA (687bp) protein (229aa)
trmD; tRNA (guanine-N1)-methyltransferase (EC:2.1.1.31)
trmD: tRNA (guanine-N1)-methyltransferase (db=HMMTigr db_id=TIGR00088 from=1 to=225 evalue=6.9e-109 interpro_id=IPR002649 interpro_description=tRNA (guanine-N1-)-methyltransferase, bacteria GO=Molecular Function: RNA binding (GO:0003723), Biological Process: tRNA processing (GO:0008033), Molecular Function: tRNA (guanine-N1-)-methyltransferase activity (GO:0009019))
tRNA-(m1G37) methyltransferase (db=HMMPIR db_id=PIRSF000386 from=1 to=228 evalue=2.9e-107 interpro_id=IPR002649 interpro_description=tRNA (guanine-N1-)-methyltransferase, bacteria GO=Molecular Function: RNA binding (GO:0003723), Biological Process: tRNA processing (GO:0008033), Molecular Function: tRNA (guanine-N1-)-methyltransferase activity (GO:0009019))
alpha/beta knot (db=superfamily db_id=SSF75217 from=1 to=226 evalue=1.8e-77)
ACD37_163_6

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comp(3721..3966)
DNA (246bp) protein (82aa)
hypothetical protein
Prokaryotic type KH domain (KH-domain type II) (db=superfamily db_id=SSF54814 from=7 to=67 evalue=5.6e-07 interpro_id=IPR009019 interpro_description=K Homology, prokaryotic type GO=Molecular Function: RNA binding (GO:0003723))
KH_1 (db=HMMPfam db_id=PF00013 from=38 to=65 evalue=4.2e-05 interpro_id=IPR018111 interpro_description=K Homology, type 1, subgroup GO=Molecular Function: RNA binding (GO:0003723))
KH_TYPE_1 (db=ProfileScan db_id=PS50084 from=33 to=81 evalue=9.477 interpro_id=IPR004088 interpro_description=K Homology, type 1 GO=Molecular Function: RNA binding (GO:0003723))
Displaying 6 items

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