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ACD37_254

Alias: ACD37_526993.6219.5

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD37_254_1
GWA2_OP11_nov_40_16, Levybacteria, Microgenomates, Bacteria

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1..234
DNA (234bp) protein (78aa)
efp; translation elongation factor P
EFP (db=PatternScan db_id=PS01275 from=42 to=61 evalue=0.0 interpro_id=IPR013852 interpro_description=Translation elongation factor P/YeiP, conserved site)
no description (db=HMMSmart db_id=SM00841 from=21 to=76 evalue=3.0e-27 interpro_id=IPR015365 interpro_description=Elongation factor P, C-terminal)
Elong-fact-P_C (db=HMMPfam db_id=PF09285 from=21 to=76 evalue=1.3e-24 interpro_id=IPR015365 interpro_description=Elongation factor P, C-terminal)
ACD37_254_2
Microgenomates bacterium GW2011_GWC1_39_7, Microgenomates, Bacteria

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251..1606
DNA (1356bp) protein (452aa)
major facilitator superfamily protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=55 to=77)
transmembrane_regions (db=TMHMM db_id=tmhmm from=26 to=48)
seg (db=Seg db_id=seg from=15 to=28)
ACD37_254_3
GWB1_OP11_39_7, Levybacteria, Microgenomates, Bacteria

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1608..2255
DNA (648bp) protein (216aa)
seg (db=Seg db_id=seg from=160 to=175)
seg (db=Seg db_id=seg from=130 to=148)
seg (db=Seg db_id=seg from=79 to=97)
seg (db=Seg db_id=seg from=45 to=56)
ACD37_254_4
GWA2_OP11_nov_40_16, Levybacteria, Microgenomates, Bacteria

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2259..3008
DNA (750bp) protein (250aa)
Pseudouridine synthase
PSI_RLU (db=PatternScan db_id=PS01129 from=70 to=84 evalue=0.0 interpro_id=IPR006224 interpro_description=Pseudouridine synthase, RluC/RluD, conserved site GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982))
RIBOSOMAL PSEUDOURIDINE SYNTHASE (db=HMMPanther db_id=PTHR10436 from=6 to=238 evalue=1.1e-57)
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=4 to=249 evalue=2.2e-57 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982))
ACD37_254_5
GWB1_OP11_39_7, Levybacteria, Microgenomates, Bacteria

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comp(3244..3435)
DNA (192bp) protein (64aa)
3244..3435 - (rbs_motif=TATTAT rbs_spacer=6bp)
Uncharacterized protein {ECO:0000313|EMBL:KKR25284.1}; TaxID=1618464 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWB1_39_7.;"
ACD37_254_6
GWA2_OP11_nov_40_16, Levybacteria, Microgenomates, Bacteria

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3548..3706
DNA (159bp) protein (53aa)
3548..3706 + (rbs_motif=ATAAT rbs_spacer=15bp)
Uncharacterized protein {ECO:0000313|EMBL:KKR49512.1}; TaxID=1618458 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWA2_40_16.;"
ACD37_254_7
GWB1_OP11_39_7, Levybacteria, Microgenomates, Bacteria

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4321..5691
DNA (1371bp) protein (457aa)
4321..5691 + (rbs_motif=ATA rbs_spacer=10bp)
Uncharacterized protein {ECO:0000313|EMBL:KKR25286.1}; TaxID=1618464 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWB1_39_7.;"
ACD37_254_8
RLO_OP11_Levybacteria_39_17, Levybacteria, Microgenomates, Bacteria

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5715..6251
DNA (537bp) protein (179aa)
kef-type potassium/proton antiporter, cpa2 family
seg (db=Seg db_id=seg from=157 to=170)
seg (db=Seg db_id=seg from=114 to=126)
seg (db=Seg db_id=seg from=86 to=106)
Displaying 8 items

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