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ACD37_319

Alias: ACD37p_327617.12686.8

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD37_319_1

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3..335
DNA (333bp) protein (111aa)
exported protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:EKD85605.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein alias=ACD37p_327617.12686.8_1,ACD37p_327617.12686.8G0001,ACD37_C00319G00001 id=42886 tax=ACD37 species=Nitrosopumilus maritimus genus=Nitrosopumilus taxon_order=Nitrosopumilales taxon_class=unknown phylum=Thaumarchaeota organism_group=OP11 organism_desc=OP11
ACD37_319_2

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388..600
DNA (213bp) protein (71aa)
hypothetical protein
no description (db=Gene3D db_id=G3DSA:1.10.260.40 from=4 to=69 evalue=3.5e-17 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
(db=HMMPfam db_id=PF01381 from=11 to=62 evalue=7.7e-17 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=4 to=69 evalue=3.6e-15 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
ACD37_319_3

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590..955
DNA (366bp) protein (122aa)
seg (db=Seg db_id=seg from=99 to=109)
seg (db=Seg db_id=seg from=9 to=30)
transmembrane_regions (db=TMHMM db_id=tmhmm from=98 to=117)
transmembrane_regions (db=TMHMM db_id=tmhmm from=69 to=88)
ACD37_319_4
GWA2_OP11_37_6_partial, Microgenomates, Bacteria

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990..1340
DNA (351bp) protein (117aa)
seg (db=Seg db_id=seg from=91 to=104)
seg (db=Seg db_id=seg from=29 to=50)
seg (db=Seg db_id=seg from=2 to=21)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=21)
ACD37_319_5

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1624..3366
DNA (1743bp) protein (581aa)
hypothetical protein
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=3 to=25)
ACD37_319_6

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comp(3476..3691)
DNA (216bp) protein (72aa)
msrA; peptide methionine sulfoxide reductase (EC:1.8.4.11)
Peptide methionine sulfoxide reductase (db=superfamily db_id=SSF55068 from=1 to=57 evalue=6.9e-11 interpro_id=IPR002569 interpro_description=Peptide methionine sulphoxide reductase MsrA GO=Molecular Function: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor (GO:0016671), Biological Process: protein metabolic process (GO:0019538), Biological Process: oxidation-reduction process (GO:0055114))
(db=HMMPfam db_id=PF01625 from=4 to=47 evalue=1.5e-07 interpro_id=IPR002569 interpro_description=Peptide methionine sulphoxide reductase MsrA GO=Molecular Function: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor (GO:0016671), Biological Process: protein metabolic process (GO:0019538), Biological Process: oxidation-reduction process (GO:0055114))
no description (db=Gene3D db_id=G3DSA:3.30.1060.10 from=1 to=48 evalue=0.00029 interpro_id=IPR002569 interpro_description=Peptide methionine sulphoxide reductase MsrA GO=Molecular Function: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor (GO:0016671), Biological Process: protein metabolic process (GO:0019538), Biological Process: oxidation-reduction process (GO:0055114))
ACD37_319_7

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comp(3753..4019)
DNA (267bp) protein (89aa)
msrA; peptide methionine sulfoxide reductase (EC:1.8.4.11)
(db=HMMPfam db_id=PF01625 from=2 to=81 evalue=5.3e-30 interpro_id=IPR002569 interpro_description=Peptide methionine sulphoxide reductase MsrA GO=Molecular Function: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor (GO:0016671), Biological Process: protein metabolic process (GO:0019538), Biological Process: oxidation-reduction process (GO:0055114))
Peptide methionine sulfoxide reductase (db=superfamily db_id=SSF55068 from=1 to=74 evalue=1.3e-29 interpro_id=IPR002569 interpro_description=Peptide methionine sulphoxide reductase MsrA GO=Molecular Function: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor (GO:0016671), Biological Process: protein metabolic process (GO:0019538), Biological Process: oxidation-reduction process (GO:0055114))
METHIONINE SULFOXIDE REDUCTASE (db=HMMPanther db_id=PTHR10173 from=1 to=73 evalue=5.0e-26)
ACD37_319_8

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4089..4706
DNA (618bp) protein (206aa)
4089..4706 + ( gc_cont=0.306)
Uncharacterized protein {ECO:0000313|EMBL:EKD85603.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD37_319_9

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4703..5701
DNA (999bp) protein (333aa)
hypothetical protein
CofD_related: conserved hypothetical pro (db=HMMTigr db_id=TIGR01826 from=7 to=329 evalue=7.5e-104 interpro_id=IPR010119 interpro_description=Uncharacterised protein family UPF0052)
CofD-like (db=superfamily db_id=SSF142338 from=3 to=326 evalue=2.9e-83)
ACD37_319_10

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comp(5838..6344)
DNA (507bp) protein (169aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=115 to=137)
transmembrane_regions (db=TMHMM db_id=tmhmm from=144 to=166)
transmembrane_regions (db=TMHMM db_id=tmhmm from=83 to=105)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
ACD37_319_11

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6398..6571
DNA (174bp) protein (58aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
Uncharacterized protein {ECO:0000313|EMBL:EKD85592.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD37_319_12

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6616..7035
DNA (420bp) protein (140aa)
disulfide bond formation protein C
transmembrane_regions (db=TMHMM db_id=tmhmm from=39 to=56)
seg (db=Seg db_id=seg from=8 to=21)
transmembrane_regions (db=TMHMM db_id=tmhmm from=110 to=132)
ACD37_319_13

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7214..7555
DNA (342bp) protein (114aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R9R8_9CHLA (db=UNIREF evalue=6.0e-20 bit_score=99.8 identity=60.2 coverage=85.0877192982456)
seg (db=Seg db_id=seg from=2 to=13)
transmembrane_regions (db=TMHMM db_id=tmhmm from=29 to=51)
ACD37_319_14

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7613..8065
DNA (453bp) protein (151aa)
coiled-coil (db=Coil db_id=coil from=57 to=78 evalue=NA)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=3 to=140 evalue=4.1e-25)
no description (db=HMMSmart db_id=SM00347 from=27 to=127 evalue=3.1e-14 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
(db=HMMPfam db_id=PF01047 from=34 to=91 evalue=9.6e-11 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
ACD37_319_15

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8078..8692
DNA (615bp) protein (205aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U0V5_9CHLR (db=UNIREF evalue=3.0e-48 bit_score=194.0 identity=46.8 coverage=98.0487804878049)
(db=HMMPfam db_id=PF02589 from=99 to=198 evalue=2.5e-13 interpro_id=IPR003741 interpro_description=Domain of unknown function DUF162)
NagB/RpiA/CoA transferase-like (db=superfamily db_id=SSF100950 from=6 to=155 evalue=7.0e-06)
ACD37_319_16

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comp(8689..9771)
DNA (1083bp) protein (361aa)
RpoD subfamily RNA polymerase sigma-70 subunit
RpoD subfamily RNA polymerase sigma-70 subunit
SIGMA70_2 (db=PatternScan db_id=PS00716 from=320 to=346 evalue=0.0 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
ACD37_319_17

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comp(9804..11561)
DNA (1758bp) protein (586aa)
hypothetical protein
coiled-coil (db=Coil db_id=coil from=552 to=580 evalue=NA)
dnaG: DNA primase (db=HMMTigr db_id=TIGR01391 from=1 to=408 evalue=2.0e-122 interpro_id=IPR006295 interpro_description=DNA primase, DnaG GO=Molecular Function: DNA primase activity (GO:0003896), Biological Process: DNA replication, synthesis of RNA primer (GO:0006269))
ACD37_319_18

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comp(11738..11983)
DNA (246bp) protein (82aa)
11738..11983 - ( gc_cont=0.411)
Uncharacterized protein {ECO:0000313|EMBL:EKD85599.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD37_319_19

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12424..12720
DNA (297bp) protein (99aa)
Adenylosuccinate synthetase n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UG88_9FLAO (db=UNIREF evalue=1.0e-29 bit_score=132.0 identity=59.6 coverage=98.989898989899)
adenylosuccinate synthetase
ADENYLOSUCCINATE SYNTHETASE (db=HMMPanther db_id=PTHR11846 from=1 to=99 evalue=1.8e-45 interpro_id=IPR001114 interpro_description=Adenylosuccinate synthetase GO=Molecular Function: magnesium ion binding (GO:0000287), Molecular Function: adenylosuccinate synthase activity (GO:0004019), Molecular Function: GTP binding (GO:0005525), Cellular Component: cytoplasm (GO:0005737), Biological Process: purine nucleotide biosynthetic process (GO:0006164))
(db=HMMPfam db_id=PF00709 from=1 to=99 evalue=3.8e-38 interpro_id=IPR001114 interpro_description=Adenylosuccinate synthetase GO=Molecular Function: magnesium ion binding (GO:0000287), Molecular Function: adenylosuccinate synthase activity (GO:0004019), Molecular Function: GTP binding (GO:0005525), Cellular Component: cytoplasm (GO:0005737), Biological Process: purine nucleotide biosynthetic process (GO:0006164))
Displaying 19 items

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