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ACD38_11

Alias: ACD38_50949.8767.9

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD38_11_1
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria

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comp(3..1109)
DNA (1107bp) protein (369aa)
Large extracellular alpha-helical protein
Terpenoid cyclases/Protein prenyltransferases (db=superfamily db_id=SSF48239 from=133 to=368 evalue=4.8e-26 interpro_id=IPR008930 interpro_description=Terpenoid cylases/protein prenyltransferase alpha-alpha toroid)
MACROGLOBULIN/COMPLEMENT (db=HMMPanther db_id=PTHR11412 from=137 to=240 evalue=2.9e-13)
MHC CLASS III REGION COMPLEMENT (db=HMMPanther db_id=PTHR11412:SF9 from=137 to=240 evalue=2.9e-13)
ACD38_11_2

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1800..2066
DNA (267bp) protein (89aa)
1800..2066 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD84955.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD38_11_3

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2376..2543
DNA (168bp) protein (56aa)
2376..2543 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD84956.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD38_11_4

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2586..2684
DNA (99bp) protein (33aa)
2586..2684 + (rbs_motif=TAA rbs_spacer=4bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD84957.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD38_11_5

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3713..3994
DNA (282bp) protein (94aa)
3713..3994 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD84949.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD38_11_6
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

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comp(4357..5013)
DNA (657bp) protein (219aa)
peptidase S54, rhomboid domain-containing protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=150 to=172)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
seg (db=Seg db_id=seg from=93 to=104)
ACD38_11_7
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

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5142..5576
DNA (435bp) protein (145aa)
5142..5576 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:KKR17480.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
ACD38_11_8
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

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5748..7601
DNA (1854bp) protein (618aa)
multi-sensor signal transduction histidine kinase
multi-sensor signal transduction histidine kinase
Sensor protein n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LM63_SYNFM (db=UNIREF evalue=2.0e-85 bit_score=320.0 identity=33.92 coverage=96.2783171521036)
transmembrane_regions (db=TMHMM db_id=tmhmm from=113 to=132)
ACD38_11_9
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

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7604..7969
DNA (366bp) protein (122aa)
Response regulator receiver domain protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YJB4_9FLAO (db=UNIREF evalue=1.0e-19 bit_score=98.2 identity=41.53 coverage=95.9016393442623)
response regulator receiver
CheY-like (db=superfamily db_id=SSF52172 from=2 to=119 evalue=6.2e-26 interpro_id=IPR011006 interpro_description=CheY-like)
no description (db=HMMSmart db_id=SM00448 from=3 to=114 evalue=2.2e-23 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
ACD38_11_10
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(7956..8615)
DNA (660bp) protein (220aa)
hypothetical protein
seg (db=Seg db_id=seg from=39 to=53)
transmembrane_regions (db=TMHMM db_id=tmhmm from=37 to=56)
no description (db=HMMSmart db_id=SM00257 from=83 to=130 evalue=2.4e-12 interpro_id=IPR002482 interpro_description=Peptidoglycan-binding Lysin subgroup GO=Biological Process: cell wall macromolecule catabolic process (GO:0016998))
Displaying 10 items

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