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ACD38_16

Alias: ACD38_27040.31720.10

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Displaying items 31-37 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD38_16_31
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

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26142..26645
DNA (504bp) protein (168aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
seg (db=Seg db_id=seg from=3 to=17)
seg (db=Seg db_id=seg from=42 to=52)
ACD38_16_32
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

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comp(26642..27259)
DNA (618bp) protein (206aa)
hypothetical protein
DUF162 (db=HMMPfam db_id=PF02589 from=101 to=199 evalue=1.9e-13 interpro_id=IPR003741 interpro_description=Lactate utilization protein B/C)
NagB/RpiA/CoA transferase-like (db=superfamily db_id=SSF100950 from=6 to=186 evalue=4.5e-07)
hypothetical protein alias=ACD38_27040.31720.10G0032,ACD38_27040.31720.10_32,ACD38_C00016G00032 id=43332 tax=ACD38 species=Catenulispora acidiphila genus=Catenulispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria organism_group=OP11 organism_desc=OP11
ACD38_16_33
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria

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comp(27267..28358)
DNA (1092bp) protein (364aa)
peptidase M24
seg (db=Seg db_id=seg from=131 to=142)
seg (db=Seg db_id=seg from=113 to=128)
PROLINE_PEPTIDASE (db=PatternScan db_id=PS00491 from=293 to=305 evalue=0.0 interpro_id=IPR001131 interpro_description=Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site GO=Biological Process: proteolysis (GO:0006508), Molecular Function: metalloexopeptidase activity (GO:0008235))
ACD38_16_34
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(28391..28828)
DNA (438bp) protein (146aa)
DNA-binding protein
PilT protein domain protein n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DQP9_9BACL (db=UNIREF evalue=1.0e-09 bit_score=65.5 identity=31.51 coverage=94.5205479452055)
TIGR00305: probable toxin-antitoxin system (db=HMMTigr db_id=TIGR00305 from=3 to=121 evalue=7.3e-09 interpro_id=IPR002850 interpro_description=Protein of unknown function DUF132)
PIN domain-like (db=superfamily db_id=SSF88723 from=1 to=127 evalue=2.0e-08)
ACD38_16_35
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(28835..29137)
DNA (303bp) protein (101aa)
coiled-coil (db=Coil db_id=coil from=75 to=96 evalue=NA)
PhdYeFM (db=HMMPfam db_id=PF02604 from=5 to=59 evalue=4.9e-11 interpro_id=IPR006442 interpro_description=Prevent-host-death protein)
YefM-like (db=superfamily db_id=SSF143120 from=2 to=82 evalue=5.8e-08)
phd_fam: prevent-host-death family protein (db=HMMTigr db_id=TIGR01552 from=4 to=57 evalue=8.0e-08 interpro_id=IPR006442 interpro_description=Prevent-host-death protein)
ACD38_16_36
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria

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comp(29345..30310)
DNA (966bp) protein (322aa)
29345..30310 - (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_OP11_Curtissbacteria_40_16_curated
ACD38_16_37
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

31312..31644
DNA (333bp) protein (111aa)
31312..31644 + (rbs_motif=None rbs_spacer=None)
Nuclease SbcCD, D subunit {ECO:0000313|EMBL:KKR16979.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
Displaying items 31-37 of 37 in total

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