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ACD38_16

Alias: ACD38_27040.31720.10

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD38_16_1
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria

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comp(1..249)
DNA (249bp) protein (83aa)
coiled-coil (db=Coil db_id=coil from=30 to=58 evalue=NA)
seg (db=Seg db_id=seg from=19 to=37)
GrpE (db=HMMPfam db_id=PF01025 from=6 to=81 evalue=5.8e-10 interpro_id=IPR000740 interpro_description=GrpE nucleotide exchange factor GO=Molecular Function: adenyl-nucleotide exchange factor activity (GO:0000774), Cellular Component: mitochondrion (GO:0005739), Biological Process: protein folding (GO:0006457), Biological Process: protein import into mitochondrial matrix (GO:0030150), Molecular Function: protein homodimerization activity (GO:0042803), Molecular Function: chaperone binding (GO:0051087))
no description (db=Gene3D db_id=G3DSA:3.90.20.20 from=9 to=83 evalue=3.3e-07 interpro_id=IPR013805 interpro_description=GrpE nucleotide exchange factor, coiled-coil GO=Molecular Function: protein binding (GO:0005515))
ACD38_16_2

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comp(253..981)
DNA (729bp) protein (243aa)
Heat-inducible transcription repressor hrcA
Transcriptional regulator of heat shock gene n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B2634 (db=UNIREF evalue=7.0e-23 bit_score=110.0 identity=34.02 coverage=95.4732510288066)
seg (db=Seg db_id=seg from=14 to=24)
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=2 to=87 evalue=3.2e-25 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
ACD38_16_3
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

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comp(1030..2268)
DNA (1239bp) protein (413aa)
major facilitator superfamily protein
seg (db=Seg db_id=seg from=371 to=385)
transmembrane_regions (db=TMHMM db_id=tmhmm from=80 to=99)
transmembrane_regions (db=TMHMM db_id=tmhmm from=109 to=131)
ACD38_16_4
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

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2382..3083
DNA (702bp) protein (234aa)
ATP-NAD/AcoX kinase n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9R6_9BACT (db=UNIREF evalue=2.0e-41 bit_score=172.0 identity=36.44 coverage=98.7179487179487)
ATP-NAD/AcoX kinase; K00858 NAD+ kinase [EC:2.7.1.23] (db=KEGG evalue=9.0e-09 bit_score=63.9 identity=26.29 coverage=82.9059829059829)
NAD kinase (db=superfamily db_id=SSF111331 from=13 to=222 evalue=1.2e-19 interpro_id=IPR016064 interpro_description=ATP-NAD kinase, PpnK-type GO=Molecular Function: NAD+ kinase activity (GO:0003951), Biological Process: metabolic process (GO:0008152))
NAD_kinase (db=HMMPfam db_id=PF01513 from=11 to=217 evalue=8.8e-13 interpro_id=IPR002504 interpro_description=ATP-NAD/AcoX kinase GO=Molecular Function: NAD+ kinase activity (GO:0003951), Biological Process: metabolic process (GO:0008152))
ACD38_16_5
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

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comp(3115..3729)
DNA (615bp) protein (205aa)
phosphorylated carbohydrates phosphatase (EC:3.1.3.-)
2-DEOXYGLUCOSE-6-PHOSPHATE PHOSPHATASE 2 (db=HMMPanther db_id=PTHR18901 from=1 to=204 evalue=6.5e-47)
HAD-like (db=superfamily db_id=SSF56784 from=1 to=204 evalue=9.0e-47)
no description (db=Gene3D db_id=G3DSA:3.40.50.1000 from=57 to=199 evalue=6.1e-36)
ACD38_16_6
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria

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comp(3763..4737)
DNA (975bp) protein (325aa)
muramoyltetrapeptide carboxypeptidase
Peptidase U61 LD-carboxypeptidase A n=1 Tax=Streptomyces lasaliensis RepID=B5M9M7_9ACTO (db=UNIREF evalue=1.0e-52 bit_score=210.0 identity=35.58 coverage=98.7692307692308)
seg (db=Seg db_id=seg from=178 to=189)
Peptidase_S66 (db=HMMPfam db_id=PF02016 from=15 to=309 evalue=6.8e-74 interpro_id=IPR003507 interpro_description=Peptidase S66, LD-carboxypeptidase A)
ACD38_16_7
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

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comp(5012..5521)
DNA (510bp) protein (170aa)
yqkA; hypothetical protein
seg (db=Seg db_id=seg from=131 to=146)
coiled-coil (db=Coil db_id=coil from=55 to=76 evalue=NA)
UPF0157 (db=HMMPfam db_id=PF04229 from=5 to=167 evalue=1.6e-35 interpro_id=IPR007344 interpro_description=Uncharacterised protein family UPF0157)
ACD38_16_8
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria

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comp(7677..8111)
DNA (435bp) protein (145aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=18 to=40)
transmembrane_regions (db=TMHMM db_id=tmhmm from=52 to=74)
transmembrane_regions (db=TMHMM db_id=tmhmm from=89 to=111)
mviN1; integral membrane protein MviN; K03980 virulence factor Tax=RIFCSPHIGHO2_02_FULL_OP11_Curtissbacteria_40_16_curated
ACD38_16_9

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9001..9186
DNA (186bp) protein (62aa)
seg (db=Seg db_id=seg from=22 to=35)
Uncharacterized protein {ECO:0000313|EMBL:EKD85102.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD38_16_10
GWF2_OP11_38_7, Daviesbacteria, Microgenomates, Bacteria

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9474..9770
DNA (297bp) protein (99aa)
seg (db=Seg db_id=seg from=83 to=98)
Ribosomal protein S20 (db=superfamily db_id=SSF46992 from=3 to=94 evalue=1.1e-13 interpro_id=IPR002583 interpro_description=Ribosomal protein S20 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
S20: ribosomal protein S20 (db=HMMTigr db_id=TIGR00029 from=1 to=80 evalue=1.5e-12 interpro_id=IPR002583 interpro_description=Ribosomal protein S20 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
no description (db=Gene3D db_id=G3DSA:1.20.58.110 from=5 to=94 evalue=4.3e-12 interpro_id=IPR002583 interpro_description=Ribosomal protein S20 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD38_16_11
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

9818..10897
DNA (1080bp) protein (360aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
Uncharacterized protein {ECO:0000313|EMBL:KKR17004.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
ACD38_16_12
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

10958..11542
DNA (585bp) protein (195aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=33 to=55)
PilN (db=HMMPfam db_id=PF05137 from=45 to=169 evalue=2.1e-05 interpro_id=IPR007813 interpro_description=Fimbrial assembly)
Uncharacterized protein {ECO:0000313|EMBL:KKR17003.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
ACD38_16_13
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

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11552..12157
DNA (606bp) protein (202aa)
seg (db=Seg db_id=seg from=30 to=43)
transmembrane_regions (db=TMHMM db_id=tmhmm from=23 to=45)
coiled-coil (db=Coil db_id=coil from=108 to=129 evalue=NA)
coiled-coil (db=Coil db_id=coil from=52 to=73 evalue=NA)
ACD38_16_14
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

12159..12335
DNA (177bp) protein (59aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
seg (db=Seg db_id=seg from=7 to=19)
Uncharacterized protein {ECO:0000313|EMBL:KKR17001.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
ACD38_16_15
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

12332..12691
DNA (360bp) protein (120aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=31)
seg (db=Seg db_id=seg from=13 to=27)
seg (db=Seg db_id=seg from=98 to=119)
Uncharacterized protein {ECO:0000313|EMBL:KKR17000.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
ACD38_16_16
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

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12820..13347
DNA (528bp) protein (176aa)
EF_HAND_1 (db=PatternScan db_id=PS00018 from=147 to=159 evalue=0.0 interpro_id=IPR018247 interpro_description=EF-Hand 1, calcium-binding site)
Type I dockerin domain (db=superfamily db_id=SSF63446 from=118 to=175 evalue=3.2e-07 interpro_id=IPR016134 interpro_description=Cellulosome enzyme, dockerin type I GO=Biological Process: polysaccharide catabolic process (GO:0000272))
Uncharacterized protein {ECO:0000313|EMBL:KKR17000.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
ACD38_16_17
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

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comp(13316..13966)
DNA (651bp) protein (217aa)
13316..13966 - (rbs_motif=TAA rbs_spacer=6bp)
Uncharacterized protein {ECO:0000313|EMBL:KKR16999.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
ACD38_16_18
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

comp(13935..15113)
DNA (1179bp) protein (393aa)
cell envelope-related transcriptional attenuator
seg (db=Seg db_id=seg from=8 to=21)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
LytR_cpsA_psr (db=HMMPfam db_id=PF03816 from=69 to=279 evalue=6.6e-32 interpro_id=IPR004474 interpro_description=Cell envelope-related transcriptional attenuator)
ACD38_16_19
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

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comp(15179..15865)
DNA (687bp) protein (229aa)
tpiA; triosephosphate isomerase
seg (db=Seg db_id=seg from=185 to=195)
Triosephosphate isomerase (TIM) (db=superfamily db_id=SSF51351 from=6 to=224 evalue=1.4e-55 interpro_id=IPR000652 interpro_description=Triosephosphate isomerase GO=Molecular Function: triose-phosphate isomerase activity (GO:0004807), Biological Process: metabolic process (GO:0008152))
no description (db=Gene3D db_id=G3DSA:3.20.20.70 from=6 to=227 evalue=7.4e-52 interpro_id=IPR013785 interpro_description=Aldolase-type TIM barrel GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
ACD38_16_20
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

comp(15849..16148)
DNA (300bp) protein (100aa)
Methylated-DNA-[protein]-cysteine S-methyltransferase family protein n=1 Tax=Yersinia rohdei ATCC 43380 RepID=C4UUB0_YERRO (db=UNIREF evalue=5.0e-17 bit_score=90.1 identity=46.94 coverage=95.0)
methylated-DNA--[]-cysteine S-methyltransferase family protein (EC:2.1.1.63)
DNA_binding_1 (db=HMMPfam db_id=PF01035 from=2 to=84 evalue=3.2e-15 interpro_id=IPR014048 interpro_description=Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: DNA repair (GO:0006281))
Methylated DNA-protein cysteine methyltransferase, C-terminal domain (db=superfamily db_id=SSF46767 from=2 to=84 evalue=6.2e-12 interpro_id=IPR014048 interpro_description=Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: DNA repair (GO:0006281))
ACD38_16_21
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

comp(16163..16417)
DNA (255bp) protein (85aa)
thioredoxin
seg (db=Seg db_id=seg from=22 to=38)
THIOREDOXIN_1 (db=PatternScan db_id=PS00194 from=4 to=22 evalue=0.0 interpro_id=IPR017937 interpro_description=Thioredoxin, conserved site GO=Biological Process: cell redox homeostasis (GO:0045454))
THIOREDOXIN M(MITOCHONDRIAL)-TYPE (db=HMMPanther db_id=PTHR10438:SF13 from=4 to=83 evalue=4.2e-31)
ACD38_16_22
GWC2_OP11_40_12, Daviesbacteria, Microgenomates, Bacteria

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comp(16442..17287)
DNA (846bp) protein (282aa)
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5GAB0_GEOUR (db=UNIREF evalue=3.0e-108 bit_score=394.0 identity=67.65 coverage=96.0992907801418)
hypothetical protein
hypothetical protein
gur:Gura_1275 hypothetical protein alias=ACD38_27040.31720.10G0022,ACD38_27040.31720.10_22,ACD38_C00016G00022 id=43324 tax=ACD38 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=OP11 organism_desc=OP11
ACD38_16_23
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

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comp(17352..18200)
DNA (849bp) protein (283aa)
17352..18200 - (rbs_motif=TAA rbs_spacer=9bp)
Uncharacterized protein {ECO:0000313|EMBL:KKR16993.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
ACD38_16_24
GWF2_OP11_38_7, Daviesbacteria, Microgenomates, Bacteria

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comp(18248..19150)
DNA (903bp) protein (301aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=58 to=80)
seg (db=Seg db_id=seg from=12 to=27)
seg (db=Seg db_id=seg from=54 to=77)
Uncharacterized protein {ECO:0000313|EMBL:KKQ84959.1}; TaxID=1618433 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWF2_38_7.;"
ACD38_16_25
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

19171..19875
DNA (705bp) protein (235aa)
seg (db=Seg db_id=seg from=24 to=34)
Adenine nucleotide alpha hydrolases-like (db=superfamily db_id=SSF52402 from=12 to=182 evalue=6.4e-07)
no description (db=Gene3D db_id=G3DSA:3.40.50.620 from=8 to=179 evalue=0.00012 interpro_id=IPR014729 interpro_description=Rossmann-like alpha/beta/alpha sandwich fold)
Uncharacterized protein {ECO:0000313|EMBL:KKR16991.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
ACD38_16_26
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

19905..22865
DNA (2961bp) protein (987aa)
pcrA; ATP-dependent DNA helicase PcrA (EC:3.6.4.12)
pcrA; ATP-dependent DNA helicase PcrA (EC:3.6.4.12)
UPI0001D5C16B related cluster n=1 Tax=unknown RepID=UPI0001D5C16B (db=UNIREF evalue=4.0e-180 bit_score=636.0 identity=35.69 coverage=98.5815602836879)
seg (db=Seg db_id=seg from=674 to=692)
ACD38_16_27
GWF2_OP11_38_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

22866..23564
DNA (699bp) protein (233aa)
hypothetical protein
seg (db=Seg db_id=seg from=74 to=89)
G5 (db=HMMPfam db_id=PF07501 from=51 to=126 evalue=5.4e-15 interpro_id=IPR011098 interpro_description=G5 GO=Molecular Function: hydrolase activity (GO:0016787))
3D (db=HMMPfam db_id=PF06725 from=173 to=231 evalue=9.0e-14 interpro_id=IPR010611 interpro_description=3D GO=Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553), Biological Process: peptidoglycan turnover (GO:0009254), Cellular Component: outer membrane (GO:0019867))
ACD38_16_28
GWF2_OP11_38_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(23632..24327)
DNA (696bp) protein (232aa)
seg (db=Seg db_id=seg from=42 to=58)
seg (db=Seg db_id=seg from=8 to=20)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Uncharacterized protein {ECO:0000313|EMBL:KKQ83891.1}; TaxID=1618433 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWF2_38_7.;"
ACD38_16_29
GWF2_OP11_38_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

24385..25041
DNA (657bp) protein (219aa)
hypothetical protein
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CSH2_PAESJ (db=UNIREF evalue=5.0e-11 bit_score=70.9 identity=31.79 coverage=65.296803652968)
transmembrane_regions (db=TMHMM db_id=tmhmm from=37 to=59)
seg (db=Seg db_id=seg from=19 to=30)
ACD38_16_30
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

25058..26140
DNA (1083bp) protein (361aa)
femAB
seg (db=Seg db_id=seg from=347 to=360)
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=151 to=318 evalue=6.0e-43 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=159 to=344 evalue=2.8e-38 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
Displaying items 1-30 of 37 in total

View Taxonomy