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ACD38_18

Alias: ACD38_60842.46863.10

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD38_18_1
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

2..1348
DNA (1347bp) protein (449aa)
Cna B domain protein
Fibrinogen-binding protein-like n=1 Tax=uncultured archaeon GZfos1D1 RepID=Q64C79_9ARCH (db=UNIREF evalue=3.0e-19 bit_score=100.0 identity=40.24 coverage=34.075723830735)
seg (db=Seg db_id=seg from=434 to=445)
seg (db=Seg db_id=seg from=84 to=104)
ACD38_18_2
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

1338..2240
DNA (903bp) protein (301aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=275 to=294)
seg (db=Seg db_id=seg from=256 to=269)
seg (db=Seg db_id=seg from=87 to=102)
Fibronectin type III (db=superfamily db_id=SSF49265 from=106 to=196 evalue=7.5e-15 interpro_id=IPR008957 interpro_description=Fibronectin, type III-like fold)
ACD38_18_3
GWC2_OP11_40_12, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

2335..4296
DNA (1962bp) protein (654aa)
hypothetical protein
hypothetical protein
UvrABC system protein B n=1 Tax=Lactobacillus vaginalis ATCC 49540 RepID=C2ETF4_9LACO (db=UNIREF evalue=0.0 bit_score=810.0 identity=59.64 coverage=99.2354740061162)
seg (db=Seg db_id=seg from=107 to=119)
ACD38_18_4
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(4293..4484)
DNA (192bp) protein (64aa)
4293..4484 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:KKR16843.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
ACD38_18_5
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

comp(4739..4981)
DNA (243bp) protein (81aa)
4739..4981 - (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_OP11_Curtissbacteria_40_16_curated
ACD38_18_6
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(5012..6577)
DNA (1566bp) protein (522aa)
seg (db=Seg db_id=seg from=418 to=436)
seg (db=Seg db_id=seg from=208 to=219)
seg (db=Seg db_id=seg from=174 to=185)
coiled-coil (db=Coil db_id=coil from=381 to=402 evalue=NA)
ACD38_18_7
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(6589..9636)
DNA (3048bp) protein (1016aa)
seg (db=Seg db_id=seg from=700 to=711)
seg (db=Seg db_id=seg from=160 to=179)
seg (db=Seg db_id=seg from=144 to=153)
coiled-coil (db=Coil db_id=coil from=152 to=194 evalue=NA)
ACD38_18_8

Not on your lists

9756..12698
DNA (2943bp) protein (981aa)
Excinuclease ABC, A subunit n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CG67_THET1 (db=UNIREF evalue=0.0 bit_score=1159.0 identity=59.09 coverage=96.1264016309888)
hypothetical protein
hypothetical protein
uvra: excinuclease ABC subunit A (db=HMMTigr db_id=TIGR00630 from=5 to=965 evalue=0.0 interpro_id=IPR004602 interpro_description=Excinuclease ABC, A subunit GO=Biological Process: nucleotide-excision repair (GO:0006289), Cellular Component: excinuclease repair complex (GO:0009380), Molecular Function: excinuclease ABC activity (GO:0009381))
ACD38_18_9

Not on your lists

12730..14688
DNA (1959bp) protein (653aa)
hypothetical protein
Transglutaminase domain protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PXL4_9CLOT (db=UNIREF evalue=7.0e-16 bit_score=89.7 identity=29.44 coverage=33.9969372128637)
transmembrane_regions (db=TMHMM db_id=tmhmm from=616 to=638)
transmembrane_regions (db=TMHMM db_id=tmhmm from=22 to=44)
ACD38_18_10
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

14685..15995
DNA (1311bp) protein (437aa)
Excinuclease ABC subunit C
seg (db=Seg db_id=seg from=400 to=415)
seg (db=Seg db_id=seg from=257 to=274)
UvrC_HhH_N (db=HMMPfam db_id=PF08459 from=277 to=422 evalue=4.6e-41 interpro_id=IPR001162 interpro_description=Excinuclease ABC, C subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: nuclease activity (GO:0004518), Biological Process: nucleotide-excision repair (GO:0006289))
ACD38_18_11
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

15992..16393
DNA (402bp) protein (134aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=108 to=130)
transmembrane_regions (db=TMHMM db_id=tmhmm from=61 to=83)
transmembrane_regions (db=TMHMM db_id=tmhmm from=34 to=56)
seg (db=Seg db_id=seg from=51 to=66)
ACD38_18_12
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

16433..17275
DNA (843bp) protein (281aa)
seg (db=Seg db_id=seg from=247 to=264)
seg (db=Seg db_id=seg from=203 to=222)
seg (db=Seg db_id=seg from=183 to=197)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
ACD38_18_13

Not on your lists

17299..17514
DNA (216bp) protein (72aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
seg (db=Seg db_id=seg from=7 to=24)
transmembrane_regions (db=TMHMM db_id=tmhmm from=49 to=70)
SecG (db=HMMPfam db_id=PF03840 from=3 to=67 evalue=7.8e-11 interpro_id=IPR004692 interpro_description=Preprotein translocase SecG subunit GO=Biological Process: protein secretion (GO:0009306), Molecular Function: P-P-bond-hydrolysis-driven protein transmembrane transporter activity (GO:0015450), Cellular Component: integral to membrane (GO:0016021))
ACD38_18_14
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

17523..18905
DNA (1383bp) protein (461aa)
putative periplasmic oligopeptide-binding protein of oligopeptide ABC transporter
seg (db=Seg db_id=seg from=3 to=14)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=39)
Periplasmic binding protein-like II (db=superfamily db_id=SSF53850 from=66 to=447 evalue=9.8e-46)
ACD38_18_15
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

comp(18909..19328)
DNA (420bp) protein (140aa)
seg (db=Seg db_id=seg from=39 to=51)
seg (db=Seg db_id=seg from=12 to=23)
transmembrane_regions (db=TMHMM db_id=tmhmm from=49 to=71)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
ACD38_18_16
GWC2_OP11_40_12, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(19459..20553)
DNA (1095bp) protein (365aa)
corA; CorA ion transporter
Putative CorA-like transport protein n=1 Tax=uncultured crenarchaeote RepID=Q702F2_9CREN (db=UNIREF evalue=2.0e-74 bit_score=283.0 identity=43.59 coverage=84.6575342465753)
seg (db=Seg db_id=seg from=336 to=354)
transmembrane_regions (db=TMHMM db_id=tmhmm from=294 to=316)
ACD38_18_17
GWF2_OP11_38_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(20662..21114)
DNA (453bp) protein (151aa)
phospholipid-binding protein, PBP family
PEBP-like (db=superfamily db_id=SSF49777 from=1 to=147 evalue=8.8e-47 interpro_id=IPR008914 interpro_description=Phosphatidylethanolamine-binding protein PEBP)
TIGR00481: Raf kinase inhibitor-like protei (db=HMMTigr db_id=TIGR00481 from=6 to=142 evalue=9.3e-46 interpro_id=IPR005247 interpro_description=YbhB/YbcL)
no description (db=Gene3D db_id=G3DSA:3.90.280.10 from=1 to=142 evalue=4.0e-45 interpro_id=IPR008914 interpro_description=Phosphatidylethanolamine-binding protein PEBP)
ACD38_18_18
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

21272..21745
DNA (474bp) protein (158aa)
21272..21745 + (rbs_motif=TAA rbs_spacer=9bp)
Uncharacterized protein {ECO:0000313|EMBL:KKR16829.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
ACD38_18_19
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

21818..22582
DNA (765bp) protein (255aa)
oxidoreductase FAD/NAD(P)-binding
seg (db=Seg db_id=seg from=16 to=35)
seg (db=Seg db_id=seg from=162 to=188)
Ferredoxin reductase-like, C-terminal NADP-linked domain (db=superfamily db_id=SSF52343 from=110 to=249 evalue=3.1e-27)
FA path, but interconverts rubredoxin Jill Banfield (11/15/12)
ACD38_18_20
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(22593..23696)
DNA (1104bp) protein (368aa)
seg (db=Seg db_id=seg from=47 to=58)
Uncharacterized protein {ECO:0000313|EMBL:KKR16827.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
ACD38_18_21
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(23738..24412)
DNA (675bp) protein (225aa)
seg (db=Seg db_id=seg from=97 to=111)
Uncharacterized protein {ECO:0000313|EMBL:KKR16826.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
ACD38_18_22

Not on your lists

comp(25016..25204)
DNA (189bp) protein (63aa)
seg (db=Seg db_id=seg from=5 to=20)
Uncharacterized protein {ECO:0000313|EMBL:EKD84838.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD38_18_23
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

25424..26116
DNA (693bp) protein (231aa)
seg (db=Seg db_id=seg from=203 to=216)
seg (db=Seg db_id=seg from=2 to=17)
transmembrane_regions (db=TMHMM db_id=tmhmm from=205 to=224)
transmembrane_regions (db=TMHMM db_id=tmhmm from=154 to=176)
ACD38_18_24
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

26259..28040
DNA (1782bp) protein (594aa)
Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VSN2_9CLOT (db=UNIREF evalue=8.0e-180 bit_score=634.0 identity=54.64 coverage=99.1582491582492)
GTP-binding protein TypA
GTP-binding protein TypA
EFACTOR_GTP (db=PatternScan db_id=PS00301 from=45 to=60 evalue=0.0 interpro_id=IPR000795 interpro_description=Protein synthesis factor, GTP-binding GO=Molecular Function: GTPase activity (GO:0003924), Molecular Function: GTP binding (GO:0005525))
ACD38_18_25
GWF2_OP11_38_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(28048..28293)
DNA (246bp) protein (82aa)
28048..28293 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:KKQ85498.1}; TaxID=1618433 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWF2_38_7.;"
ACD38_18_26
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

28466..28876
DNA (411bp) protein (137aa)
28466..28876 + (rbs_motif=TAAT rbs_spacer=9bp)
Uncharacterized protein {ECO:0000313|EMBL:KKR16821.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
ACD38_18_27
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

28896..29681
DNA (786bp) protein (262aa)
seg (db=Seg db_id=seg from=94 to=107)
seg 94..107 Tax=RIFCSPHIGHO2_02_FULL_OP11_Curtissbacteria_40_16_curated
ACD38_18_28
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

29923..30147
DNA (225bp) protein (75aa)
seg (db=Seg db_id=seg from=62 to=74)
seg 62..74 Tax=RIFCSPHIGHO2_02_FULL_OP11_Curtissbacteria_40_16_curated
ACD38_18_29
GWF2_OP11_38_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(30478..31305)
DNA (828bp) protein (276aa)
glucokinase
ROK FAMILY (db=HMMPanther db_id=PTHR18964 from=61 to=272 evalue=1.1e-42)
GLUCOSE KINASE (db=HMMPanther db_id=PTHR18964:SF37 from=61 to=272 evalue=1.1e-42)
Actin-like ATPase domain (db=superfamily db_id=SSF53067 from=1 to=274 evalue=1.0e-36)
ACD38_18_30
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

31662..32279
DNA (618bp) protein (206aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
Sortase (db=HMMPfam db_id=PF04203 from=65 to=204 evalue=3.5e-21 interpro_id=IPR005754 interpro_description=Peptidase C60, sortase A/B)
Sortase (db=superfamily db_id=SSF63817 from=48 to=204 evalue=1.3e-15)
Displaying items 1-30 of 50 in total

View Taxonomy